contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA255848" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 368705 | 368705 | PRJNA255848_P_NODE_42381_length_164_cov_0.886957_g42063_i0 | PRJNA255848 | 42381 | 164 | 0.886957 | 1.45460948 | Thermus sp. NEB1569 | 2918899 | Bacteria | Bacteria | 302 | 1.23e-77 | NTclustered | gi|2199052145|gb|CP092445.1| | 2918899 | g42063 | i0 | 100 | 0.99390243902439 | 163 | 0 | 99 | 0 | 2 | 164 | 62237 | 62399 | Thermus sp. NEB1569 chromosome, complete genome | blastn | 163 | 302 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus sp. NEB1569 | ||
| 3607568 | 3607568 | PRJNA255848_P_NODE_6423_length_431_cov_2.903141_g6105_i0 | PRJNA255848 | 6423 | 431 | 2.903141 | 12.51253771 | Deinococcus | 1298 | Bacteria | Bacteria | 785 | 0 | NTclustered | gi|2425458098|gb|OQ221948.1| | 47478 | g6105 | i0 | 99.536 | 109.816705336427 | 431 | 2 | 100 | 0 | 1 | 431 | 418 | 848 | Deinococcus sp. strain 934 16S ribosomal RNA gene, partial sequence | blastn | 47331 | 785 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 4195823 | 4195823 | PRJNA255848_P_NODE_35344_length_167_cov_0.864407_g35026_i0 | PRJNA255848 | 35344 | 167 | 0.864407 | 1.44355969 | Thermus sp. NEB1569 | 2918899 | Bacteria | Bacteria | 307 | 2.71e-79 | NTclustered | gi|2199052145|gb|CP092445.1| | 2918899 | g35026 | i0 | 100 | 56.5508982035928 | 166 | 0 | 99 | 0 | 2 | 167 | 459913 | 460078 | Thermus sp. NEB1569 chromosome, complete genome | blastn | 9444 | 307 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus sp. NEB1569 | ||
| 7434972 | 7434972 | PRJNA255848_P_NODE_47586_length_161_cov_0.910714_g47268_i0 | PRJNA255848 | 47586 | 161 | 0.910714 | 1.46624954 | Deinococcus | 1298 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|83699285|dbj|AB244334.1| | 362240 | g47268 | i0 | 100 | 106.391304347826 | 161 | 0 | 100 | 0 | 1 | 161 | 257 | 97 | Deinococcus sp. DaeR-4 gene for 16S rRNA, partial sequence | blastn | 17129 | 298 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. DaeR-4 | ||
| 13122502 | 13122502 | PRJNA255848_P_NODE_36131_length_167_cov_0.864407_g35813_i0 | PRJNA255848 | 36131 | 167 | 0.864407 | 1.44355969 | Allomeiothermus silvanus | 52022 | Bacteria | Bacteria | 89.8 | 1.07e-13 | NTclustered | gi|296848933|gb|CP002042.1| | 526227 | g35813 | i0 | 86.42 | 0.48502994011976 | 81 | 11 | 49 | 0 | 87 | 167 | 2427526 | 2427446 | Meiothermus silvanus DSM 9946, complete genome | blastn | 81 | 89.8 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Allomeiothermus | Allomeiothermus silvanus | ||
| 13810408 | 13810408 | PRJNA255848_P_NODE_32291_length_175_cov_1.047619_g31973_i0 | PRJNA255848 | 32291 | 175 | 1.047619 | 1.83333325 | Deinococcus | 1298 | Bacteria | Bacteria | 261 | 2.25e-65 | NTclustered | gi|1028459476|gb|CP011387.1| | 1182568 | g31973 | i0 | 94.643 | 180.982857142857 | 168 | 9 | 96 | 0 | 1 | 168 | 69618 | 69785 | Deinococcus puniceus strain DY1, complete genome | blastn | 31672 | 261 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus puniceus | ||
| 14397795 | 14397795 | PRJNA255848_P_NODE_5892_length_454_cov_2.340741_g5574_i0 | PRJNA255848 | 5892 | 454 | 2.340741 | 10.62696414 | Deinococcus ficus | 317577 | Bacteria | Bacteria | 784 | 0 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g5574 | i0 | 98.009 | 195.114537444934 | 452 | 7 | 99 | 2 | 4 | 454 | 2341710 | 2341260 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 88582 | 784 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 15084361 | 15084361 | PRJNA255848_P_NODE_12132_length_292_cov_3.000000_g11814_i0 | PRJNA255848 | 12132 | 292 | 3 | 8.76 | Deinococcus | 1298 | Bacteria | Bacteria | 540 | 4.74e-149 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g11814 | i0 | 100 | 98.1335616438356 | 292 | 0 | 100 | 0 | 1 | 292 | 26386 | 26095 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 28655 | 540 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 18220296 | 18220296 | PRJNA255848_P_NODE_14315_length_265_cov_1.532407_g13997_i0 | PRJNA255848 | 14315 | 265 | 1.532407 | 4.06087855 | Deinococcus ficus | 317577 | Bacteria | Bacteria | 473 | 4.3599999999999987e-129 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g13997 | i0 | 98.872 | 181.690566037736 | 266 | 2 | 100 | 1 | 1 | 265 | 2340938 | 2340673 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 48148 | 473 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 18220405 | 18220405 | PRJNA255848_P_NODE_42895_length_163_cov_0.894737_g42577_i0 | PRJNA255848 | 42895 | 163 | 0.894737 | 1.45842131 | Allomeiothermus silvanus | 52022 | Bacteria | Bacteria | 268 | 1.24e-67 | NTclustered | gi|296848933|gb|CP002042.1| | 526227 | g42577 | i0 | 96.319 | 1 | 163 | 6 | 100 | 0 | 1 | 163 | 335894 | 336056 | Meiothermus silvanus DSM 9946, complete genome | blastn | 163 | 268 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Allomeiothermus | Allomeiothermus silvanus | ||
| 20183105 | 20183105 | PRJNA255848_P_NODE_46436_length_161_cov_1.821429_g46118_i0 | PRJNA255848 | 46436 | 161 | 1.821429 | 2.93250069 | Thermus | 270 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|2440484278|gb|CP046617.1| | 88190 | g46118 | i0 | 100 | 9.54658385093168 | 161 | 0 | 100 | 0 | 1 | 161 | 858922 | 859082 | Thermus antranikianii strain JCM 19900 chromosome, complete genome | blastn | 1537 | 298 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus antranikianii | ||
| 22045363 | 22045363 | PRJNA255848_P_NODE_5518_length_471_cov_1.618483_g5203_i0 | PRJNA255848 | 5518 | 471 | 1.618483 | 7.62305493 | Deinococcus ficus | 317577 | Bacteria | Bacteria | 821 | 0 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g5203 | i0 | 98.701 | 248.662420382166 | 462 | 6 | 98 | 0 | 10 | 471 | 2342728 | 2342267 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 117120 | 821 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 25282950 | 25282950 | PRJNA255848_P_NODE_15240_length_256_cov_2.077295_g14922_i0 | PRJNA255848 | 15240 | 256 | 2.077295 | 5.3178752 | Deinococcus | 1298 | Bacteria | Bacteria | 446 | 9.139999999999999e-121 | NTclustered | gi|470483488|ref|NR_076595.1| | 310783 | g14922 | i0 | 98.054 | 306.84375 | 257 | 4 | 100 | 1 | 1 | 256 | 916 | 1172 | Deinococcus deserti strain VCD115 23S ribosomal RNA gene, complete sequence | blastn | 78552 | 446 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus deserti |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;