RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA255848" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA255848 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
368622 368622 PRJNA255848_P_NODE_1_length_7218_cov_116.411354_g0_i0 PRJNA255848 1 7218 116.411354 8402.57153172 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2909 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g0 i0 96.128 0.666666666666667 1782 66 67 3 5432 7212 5329 7108 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 4812 2909 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
5472056 5472056 PRJNA255848_P_NODE_36445_length_167_cov_0.864407_g36127_i0 PRJNA255848 36445 167 0.864407 1.44355969 Zebrafish picornavirus 1 2304617 Viruses Viruses 281 1.64e-71   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g36127 i0 97.006 3 167 5 100 0 1 167 3606 3440 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 501 281 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
11847332 11847332 PRJNA255848_P_NODE_38170_length_166_cov_0.871795_g37852_i0 PRJNA255848 38170 166 0.871795 1.4471797 Erysiphe necator associated ourmia-like virus 119 2741779 Viruses Viruses 307 2.69e-79   NTclustered gi|1848976769|gb|MN611646.1| 2741779 g37852 i0 100 7.95783132530121 166 0 100 0 1 166 434 269 Erysiphe necator associated ourmia-like virus 119 isolate PMS8_126, complete genome blastn 1321 307 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Ourmiavirus Erysiphe necator associated ourmia-like virus 119
13122448 13122448 PRJNA255848_P_NODE_22371_length_211_cov_0.944444_g22053_i0 PRJNA255848 22371 211 0.944444 1.99277684 Scleroulivirus epsilonplasmoparae 2956408 Viruses Viruses 351 1.63e-92   NTclustered gi|2500381362|ref|NC_076793.1| 2686535 g22053 i0 96.682 5.98104265402844 211 7 100 0 1 211 797 587 Plasmopara viticola lesion associated ourmia-like virus 63 isolate DMG-B_Contig3 RNA dependent RNA polymerase (QKR69_gp1) gene, complete cds blastn 1262 351 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Scleroulivirus Scleroulivirus epsilonplasmoparae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;