RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA255848" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA255848 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4884768 4884768 PRJNA255848_P_NODE_12104_length_293_cov_1.225410_g11786_i0 PRJNA255848 12104 293 1.22541 3.5904513 root 1 Root_unresolved Root_unresolved 542 1.32e-149   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g11786 i0 100 100 293 0 100 0 1 293 18302 18594 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 29300 542 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
11847365 11847365 PRJNA255848_P_NODE_45770_length_162_cov_0.902655_g45452_i0 PRJNA255848 45770 162 0.902655 1.4623011 Erythrocytic necrosis virus 1543320 Viruses Viruses 267 4.419999999999999e-67   NTclustered gi|1624806662|gb|MK638698.1| 1543320 g45452 i0 96.296 6.05555555555556 162 6 100 0 1 162 400 239 Erythrocytic necrosis virus isolate SEQ_13 putative RNA-dependent DNA polymerase mRNA, complete cds blastn 981 267 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;