contig_metadata
36 rows where analysis = "blastn", bioproject = "PRJNA242641" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 367428 | 367428 | PRJNA242641_S_NODE_1101_length_219_cov_20.752632_g1073_i0 | PRJNA242641 | 1101 | 219 | 20.752632 | 45.44826408 | Escherichia coli | 562 | Bacteria | Bacteria | 381 | 2.1799999999999996e-101 | NTclustered | gi|2512282652|dbj|AP027206.1| | 562 | g1073 | i0 | 98.165 | 638.091324200913 | 218 | 4 | 99 | 0 | 1 | 218 | 4693059 | 4693276 | Escherichia coli JNE082640 DNA, complete genome | blastn | 139742 | 381 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 1056717 | 1056717 | PRJNA242641_S_NODE_221_length_497_cov_9.743590_g195_i0 | PRJNA242641 | 221 | 497 | 9.74359 | 48.4256423 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 706 | 0 | NTclustered | gi|1880867750|gb|CP056920.1| | 562 | g195 | i0 | 93.182 | 654.583501006036 | 484 | 28 | 97 | 4 | 12 | 491 | 2950788 | 2950306 | Escherichia coli strain RHB42-C23 chromosome, complete genome | blastn | 325328 | 706 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 1056718 | 1056718 | PRJNA242641_S_NODE_401_length_367_cov_4.757396_g373_i0 | PRJNA242641 | 401 | 367 | 4.757396 | 17.45964332 | Escherichia | 561 | Bacteria | Bacteria | 678 | 0 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g373 | i0 | 100 | 166.051771117166 | 367 | 0 | 100 | 0 | 1 | 367 | 226898 | 227264 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 60941 | 678 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 1642223 | 1642223 | PRJNA242641_S_NODE_2122_length_160_cov_5.832061_g2094_i0 | PRJNA242641 | 2122 | 160 | 5.832061 | 9.3312976 | Sphingomonas sp. R1 | 399176 | Bacteria | Bacteria | 268 | 1.21e-67 | NTclustered | gi|2324433304|gb|CP110111.1| | 399176 | g2094 | i0 | 96.875 | 191.7 | 160 | 5 | 100 | 0 | 1 | 160 | 1259853 | 1260012 | Sphingomonas sp. R1 chromosome, complete genome | blastn | 30672 | 268 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. R1 | ||
| 1642224 | 1642224 | PRJNA242641_S_NODE_302_length_417_cov_9.538660_g274_i0 | PRJNA242641 | 302 | 417 | 9.53866 | 39.7762122 | Acinetobacter pittii | 48296 | Bacteria | Bacteria | 710 | 0 | NTclustered | gi|2156604686|gb|CP087716.1| | 48296 | g274 | i0 | 97.362 | 647.127098321343 | 417 | 11 | 100 | 0 | 1 | 417 | 3705275 | 3704859 | Acinetobacter pittii strain AP2044 chromosome, complete genome | blastn | 269852 | 710 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter pittii | ||
| 1642226 | 1642226 | PRJNA242641_S_NODE_682_length_279_cov_13.232000_g654_i0 | PRJNA242641 | 682 | 279 | 13.232 | 36.91728 | Metapseudomonas otitidis | 319939 | Bacteria | Bacteria | 494 | 3.55e-135 | NTclustered | gi|1877551502|dbj|AP022213.1| | 319939 | g654 | i0 | 98.566 | 444.36917562724 | 279 | 4 | 100 | 0 | 1 | 279 | 685052 | 684774 | Pseudomonas otitidis DNA, complete genome, strain: WP8-S17-CRE-03 | blastn | 123979 | 494 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Metapseudomonas | Metapseudomonas otitidis | ||
| 2331936 | 2331936 | PRJNA242641_S_NODE_402_length_366_cov_19.275964_g374_i0 | PRJNA242641 | 402 | 366 | 19.275964 | 70.55002824 | Acidovorax | 12916 | Bacteria | Bacteria | 667 | 0 | NTclustered | gi|2700484197|gb|CP147774.1| | 80878 | g374 | i0 | 99.457 | 177.877049180328 | 368 | 0 | 100 | 2 | 1 | 366 | 2498699 | 2499066 | Acidovorax temperans strain AA22 chromosome | blastn | 65103 | 667 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax temperans | ||
| 3607153 | 3607153 | PRJNA242641_S_NODE_1423_length_194_cov_11.709091_g1395_i0 | PRJNA242641 | 1423 | 194 | 11.709091 | 22.71563654 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 355 | 1.14e-93 | NTclustered | gi|1109138823|gb|CP018143.1| | 470 | g1395 | i0 | 100 | 586.237113402062 | 192 | 0 | 99 | 0 | 1 | 192 | 21380 | 21571 | Acinetobacter baumannii strain HRAB-85, complete genome | blastn | 113730 | 355 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 4884651 | 4884651 | PRJNA242641_S_NODE_784_length_260_cov_5.627706_g756_i0 | PRJNA242641 | 784 | 260 | 5.627706 | 14.6320356 | Escherichia | 561 | Bacteria | Bacteria | 368 | 2.07e-97 | NTclustered | gi|1509569164|dbj|LC431221.1| | 562 | g756 | i0 | 92.337 | 327.261538461538 | 261 | 16 | 99 | 4 | 2 | 260 | 524 | 266 | Escherichia coli GM3 gene for 16S ribosomal RNA, partial sequence | blastn | 85088 | 370 | 0.994594594594595 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 4884652 | 4884652 | PRJNA242641_S_NODE_984_length_232_cov_7.817734_g956_i0 | PRJNA242641 | 984 | 232 | 7.817734 | 18.13714288 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 429 | 8.2e-116 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g956 | i0 | 100 | 669.629310344828 | 232 | 0 | 100 | 0 | 1 | 232 | 186319 | 186550 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 155354 | 429 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 5470793 | 5470793 | PRJNA242641_S_NODE_1425_length_194_cov_8.606061_g1397_i0 | PRJNA242641 | 1425 | 194 | 8.606061 | 16.69575834 | Acinetobacter baumannii | 470 | Bacteria | Bacteria | 52.8 | 0.017 | NTclustered | gi|2470454228|gb|CP113071.1| | 470 | g1397 | i0 | 100 | 0.865979381443299 | 28 | 0 | 14 | 0 | 141 | 168 | 2016407 | 2016380 | Acinetobacter baumannii strain A118 DeltaH0N27_10830::kan chromosome, complete genome | blastn | 168 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 6159422 | 6159422 | PRJNA242641_S_NODE_1005_length_230_cov_11.641791_g977_i0 | PRJNA242641 | 1005 | 230 | 11.641791 | 26.7761193 | Acinetobacter | 469 | Bacteria | Bacteria | 414 | 2.27e-111 | NTclustered | gi|1958425625|gb|CP068206.1| | 40214 | g977 | i0 | 99.13 | 547.004347826087 | 230 | 2 | 100 | 0 | 1 | 230 | 1097299 | 1097070 | Acinetobacter johnsonii strain FDAARGOS_1092 chromosome, complete genome | blastn | 125811 | 414 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 6159423 | 6159423 | PRJNA242641_S_NODE_265_length_453_cov_16.721698_g237_i0 | PRJNA242641 | 265 | 453 | 16.721698 | 75.74929194 | Acidovorax | 12916 | Bacteria | Bacteria | 713 | 0 | NTclustered | gi|2442619374|gb|CP117193.1| | 80878 | g237 | i0 | 95.165 | 254.337748344371 | 455 | 17 | 100 | 3 | 1 | 453 | 325320 | 325771 | Acidovorax temperans strain LMJ chromosome, complete genome | blastn | 115215 | 713 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax temperans | ||
| 6745103 | 6745103 | PRJNA242641_S_NODE_1946_length_167_cov_3.246377_g1918_i0 | PRJNA242641 | 1946 | 167 | 3.246377 | 5.42144959 | uncultured Alphaproteobacteria bacterium | 91750 | Bacteria | Bacteria | 289 | 9.81e-74 | NTclustered | gi|451915059|gb|KC448923.1| | 91750 | g1918 | i0 | 98.182 | 99.9221556886228 | 165 | 3 | 99 | 0 | 1 | 165 | 59 | 223 | Uncultured alpha proteobacterium clone RLBp4071 16S ribosomal RNA gene, partial sequence | blastn | 16687 | 289 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | uncultured Alphaproteobacteria bacterium | |||||
| 7434590 | 7434590 | PRJNA242641_S_NODE_2086_length_161_cov_5.363636_g2058_i0 | PRJNA242641 | 2086 | 161 | 5.363636 | 8.63545396 | root | 1 | Root_unresolved | Root_unresolved | 298 | 1.56e-76 | NTclustered | gi|1789835890|gb|CP047138.1| | 305 | g2058 | i0 | 100 | 194.006211180124 | 161 | 0 | 100 | 0 | 1 | 161 | 2786890 | 2786730 | Ralstonia solanacearum strain CFBP 8695 chromosome, complete genome | blastn | 31235 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia solanacearum | ||
| 9984759 | 9984759 | PRJNA242641_S_NODE_548_length_312_cov_14.197880_g520_i0 | PRJNA242641 | 548 | 312 | 14.19788 | 44.2973856 | root | 1 | Root_unresolved | Root_unresolved | 464 | 3.1599999999999996e-126 | NTclustered | gi|2700484197|gb|CP147774.1| | 80878 | g520 | i0 | 96.466 | 220.471153846154 | 283 | 6 | 90 | 4 | 1 | 281 | 2502719 | 2502439 | Acidovorax temperans strain AA22 chromosome | blastn | 68787 | 464 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax temperans | ||
| 11259872 | 11259872 | PRJNA242641_S_NODE_1209_length_208_cov_22.893855_g1181_i0 | PRJNA242641 | 1209 | 208 | 22.893855 | 47.6192184 | Comamonadaceae | 80864 | Bacteria | Bacteria | 385 | 1.58e-102 | NTclustered | gi|507148303|ref|NR_103106.1| | 285 | g1181 | i0 | 100 | 422.019230769231 | 208 | 0 | 100 | 0 | 1 | 208 | 1252 | 1045 | Comamonas testosteroni strain CNB-1 23S ribosomal RNA gene, complete sequence | blastn | 87780 | 385 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Comamonas testosteroni | ||
| 13810085 | 13810085 | PRJNA242641_S_NODE_1031_length_228_cov_2.246231_g1003_i0 | PRJNA242641 | 1031 | 228 | 2.246231 | 5.12140668 | Acinetobacter | 469 | Bacteria | Bacteria | 416 | 6.259999999999998e-112 | NTclustered | gi|76152395|gb|DQ188904.1| | 28090 | g1003 | i0 | 99.561 | 607.394736842105 | 228 | 1 | 100 | 0 | 1 | 228 | 903 | 1130 | Acinetobacter lwoffii 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 138486 | 416 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter lwoffii | ||
| 14396477 | 14396477 | PRJNA242641_S_NODE_1372_length_198_cov_3.502959_g1344_i0 | PRJNA242641 | 1372 | 198 | 3.502959 | 6.93585882 | Tepidimonas taiwanensis | 307486 | Bacteria | Bacteria | 333 | 5.469999999999998e-87 | NTclustered | gi|2102295900|gb|CP083911.1| | 307486 | g1344 | i0 | 96.97 | 172.636363636364 | 198 | 6 | 100 | 0 | 1 | 198 | 2755223 | 2755026 | Tepidimonas taiwanensis strain LMG 22826 chromosome, complete genome | blastn | 34182 | 333 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Tepidimonas | Tepidimonas taiwanensis | |||
| 15084238 | 15084238 | PRJNA242641_S_NODE_432_length_356_cov_4.177370_g404_i0 | PRJNA242641 | 432 | 356 | 4.17737 | 14.8714372 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 658 | 0 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g404 | i0 | 100 | 179.123595505618 | 356 | 0 | 100 | 0 | 1 | 356 | 225972 | 226327 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 63768 | 658 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 16359094 | 16359094 | PRJNA242641_S_NODE_1013_length_229_cov_14.385000_g985_i0 | PRJNA242641 | 1013 | 229 | 14.385 | 32.94165 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 418 | 1.7499999999999995e-112 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g985 | i0 | 99.563 | 679.048034934498 | 229 | 1 | 100 | 0 | 1 | 229 | 2626 | 2854 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 155502 | 418 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 16359096 | 16359096 | PRJNA242641_S_NODE_733_length_267_cov_9.789916_g705_i0 | PRJNA242641 | 733 | 267 | 9.789916 | 26.13907572 | Pseudomonas | 286 | Bacteria | Bacteria | 455 | 1.5900000000000002e-123 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g705 | i0 | 97.378 | 516.876404494382 | 267 | 7 | 100 | 0 | 1 | 267 | 9816 | 10082 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 138006 | 455 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 17634272 | 17634272 | PRJNA242641_S_NODE_2394_length_152_cov_1.943089_g2366_i0 | PRJNA242641 | 2394 | 152 | 1.943089 | 2.95349528 | Bacteria | 2 | Bacteria | Bacteria | 281 | 1.46e-71 | NTclustered | gi|1995661344|pdb|4V49|B0 | 562 | g2366 | i0 | 100 | 226.684210526316 | 152 | 0 | 100 | 0 | 1 | 152 | 1757 | 1606 | Chain B0, 23S RIBOSOMAL RNA | blastn | 34456 | 281 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 20182710 | 20182710 | PRJNA242641_S_NODE_1156_length_213_cov_3.293478_g1128_i0 | PRJNA242641 | 1156 | 213 | 3.293478 | 7.01510814 | Sphingomonas | 13687 | Bacteria | Bacteria | 350 | 5.94e-92 | NTclustered | gi|1004607058|gb|KT865766.1| | 40681 | g1128 | i0 | 96.244 | 164.948356807512 | 213 | 8 | 100 | 0 | 1 | 213 | 892 | 680 | Sphingomonas asaccharolytica strain DSM 10564 23S ribosomal RNA gene, partial sequence | blastn | 35134 | 350 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas asaccharolytica | ||
| 20182711 | 20182711 | PRJNA242641_S_NODE_16_length_1177_cov_8.582753_g13_i0 | PRJNA242641 | 16 | 1177 | 8.582753 | 101.01900281 | Ralstonia | 48736 | Bacteria | Bacteria | 590 | 2.0599999999999994e-163 | NTclustered | gi|2812790755|gb|CP170451.1| | 28097 | g13 | i0 | 77.079 | 2.8071367884452 | 1082 | 210 | 90 | 34 | 115 | 1176 | 2365078 | 2366141 | Ralstonia syzygii strain Br19 chromosome 1, complete sequence | blastn | 3304 | 590 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia syzygii | ||
| 20182712 | 20182712 | PRJNA242641_S_NODE_476_length_336_cov_3.384365_g448_i0 | PRJNA242641 | 476 | 336 | 3.384365 | 11.3714664 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 621 | 1.9299999999999997e-173 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g448 | i0 | 100 | 156.985119047619 | 336 | 0 | 100 | 0 | 1 | 336 | 226733 | 226398 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 52747 | 621 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 20182713 | 20182713 | PRJNA242641_S_NODE_836_length_251_cov_6.382883_g808_i0 | PRJNA242641 | 836 | 251 | 6.382883 | 16.02103633 | Escherichia | 561 | Bacteria | Bacteria | 429 | 8.99e-116 | NTclustered | gi|2177772739|gb|CP061239.1| | 562 | g808 | i0 | 99.16 | 662.733067729084 | 238 | 2 | 95 | 0 | 1 | 238 | 4694701 | 4694938 | Escherichia coli strain STEC506 chromosome, complete genome | blastn | 166346 | 429 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 21458401 | 21458401 | PRJNA242641_S_NODE_257_length_459_cov_15.509302_g229_i0 | PRJNA242641 | 257 | 459 | 15.509302 | 71.18769618 | Comamonadaceae | 80864 | Bacteria | Bacteria | 682 | 0 | NTclustered | gi|2442619374|gb|CP117193.1| | 80878 | g229 | i0 | 93.548 | 250.590413943355 | 465 | 19 | 100 | 8 | 1 | 459 | 325771 | 325312 | Acidovorax temperans strain LMJ chromosome, complete genome | blastn | 115021 | 688 | 0.991279069767442 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax temperans | ||
| 22044015 | 22044015 | PRJNA242641_S_NODE_178_length_540_cov_7.497065_g159_i0 | PRJNA242641 | 178 | 540 | 7.497065 | 40.484151 | Ralstonia mannitolilytica | 105219 | Bacteria | Bacteria | 442 | 2.699999999999999e-119 | NTclustered | gi|1815840196|gb|CP049133.1| | 105219 | g159 | i0 | 83.096 | 3.68518518518519 | 491 | 77 | 91 | 6 | 48 | 536 | 618207 | 617721 | Ralstonia mannitolilytica strain Guangzhou-RMAB10 chromosome 2 | blastn | 1990 | 442 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia mannitolilytica | ||
| 22044017 | 22044017 | PRJNA242641_S_NODE_38_length_973_cov_9.897246_g33_i0 | PRJNA242641 | 38 | 973 | 9.897246 | 96.30020358 | Vibrio furnissii | 29494 | Bacteria | Bacteria | 1781 | 0 | NTclustered | gi|2522625247|gb|CP128203.1| | 29494 | g33 | i0 | 99.692 | 118.197327852004 | 973 | 3 | 100 | 0 | 1 | 973 | 1059 | 87 | Vibrio furnissii strain VFBJ07 plasmid pVFBJ07-2, complete sequence | blastn | 115006 | 1781 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio furnissii | ||
| 22733455 | 22733455 | PRJNA242641_S_NODE_118_length_633_cov_17.514901_g103_i0 | PRJNA242641 | 118 | 633 | 17.514901 | 110.86932333 | root | 1 | Root_unresolved | Root_unresolved | 1125 | 0 | NTclustered | gi|2700484197|gb|CP147774.1| | 80878 | g103 | i0 | 98.736 | 295.162717219589 | 633 | 8 | 100 | 0 | 1 | 633 | 2502087 | 2502719 | Acidovorax temperans strain AA22 chromosome | blastn | 186838 | 1125 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax temperans | ||
| 25282757 | 25282757 | PRJNA242641_S_NODE_1700_length_177_cov_5.385135_g1672_i0 | PRJNA242641 | 1700 | 177 | 5.385135 | 9.53168895 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 327 | 2.2199999999999996e-85 | NTclustered | gi|2208429280|dbj|AP025653.1| | 545 | g1672 | i0 | 100 | 678.757062146893 | 177 | 0 | 100 | 0 | 1 | 177 | 3663446 | 3663270 | Citrobacter koseri TUM20903 DNA, complete genome | blastn | 120140 | 327 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Citrobacter | Citrobacter koseri | ||
| 25282758 | 25282758 | PRJNA242641_S_NODE_1760_length_174_cov_9.337931_g1732_i0 | PRJNA242641 | 1760 | 174 | 9.337931 | 16.24799994 | Sphingomonas | 13687 | Bacteria | Bacteria | 311 | 2.19e-80 | NTclustered | gi|2874253800|emb|OY969784.1| | 91750 | g1732 | i0 | 98.851 | 142.390804597701 | 174 | 2 | 100 | 0 | 1 | 174 | 1970041 | 1969868 | MAG: uncultured Alphaproteobacteria bacterium isolate MFD09603.bin.1.46 genome assembly, chromosome: 1 | blastn | 24776 | 311 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | uncultured Alphaproteobacteria bacterium | |||||
| 25282762 | 25282762 | PRJNA242641_S_NODE_2160_length_159_cov_4.384615_g2132_i0 | PRJNA242641 | 2160 | 159 | 4.384615 | 6.97153785 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 294 | 1.98e-75 | NTclustered | gi|2811453838|emb|OZ184594.1| | 58095 | g2132 | i0 | 100 | 775.327044025157 | 159 | 0 | 100 | 0 | 1 | 159 | 4683385 | 4683227 | Salmonella enterica subsp. enterica serovar Agona isolate 91 genome assembly, chromosome: 1 | blastn | 123277 | 294 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 25282766 | 25282766 | PRJNA242641_S_NODE_260_length_457_cov_14.586449_g232_i0 | PRJNA242641 | 260 | 457 | 14.586449 | 66.66007193 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 778 | 0 | NTclustered | gi|2813908796|gb|CP170500.1| | 316 | g232 | i0 | 97.374 | 418.934354485777 | 457 | 12 | 100 | 0 | 1 | 457 | 1135481 | 1135937 | Stutzerimonas stutzeri strain MBI-RS3 chromosome, complete genome | blastn | 191453 | 784 | 0.99234693877551 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Stutzerimonas | Stutzerimonas stutzeri | ||
| 25282769 | 25282769 | PRJNA242641_S_NODE_840_length_250_cov_13.298643_g812_i0 | PRJNA242641 | 840 | 250 | 13.298643 | 33.2466075 | Paracoccus | 265 | Bacteria | Bacteria | 377 | 3.29e-100 | NTclustered | gi|2800751226|gb|CP089416.1| | 59779 | g812 | i0 | 93.976 | 227.844 | 249 | 15 | 99 | 0 | 1 | 249 | 293770 | 293522 | Paracoccus marcusii strain 3501 chromosome, complete genome | blastn | 56961 | 377 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus marcusii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;