RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA235310" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 2 ✖

bioproject 1

  • PRJNA235310 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15670138 15670138 PRJNA235310_P_NODE_2053_length_274_cov_1.413333_g2027_i0 PRJNA235310 2053 274 1.413333 3.87253242 Indivirus ILV1 1977633 Viruses Viruses 108 5.3e-19   NTclustered gi|1174570775|gb|KY684086.1| 1977633 g2027 i0 83.333 0.693430656934307 120 17 43 3 120 238 146633 146516 Indivirus ILV1 isolate ILV1 clone Indivirus_2, sequence blastn 190 108 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Indivirus Indivirus ILV1
20768858 20768858 PRJNA235310_P_NODE_177_length_755_cov_1.599150_g159_i0 PRJNA235310 177 755 1.59915 12.0735825 Plotvirus plot 2170099 Viruses Viruses 62.1 1.26e-4   NTclustered gi|1720702708|gb|MN119378.1| 2596982 g159 i0 91.489 0.16953642384106 47 1 6 2 380 423 45867 45913 Mycobacterium phage Penelope2018, complete genome blastn 128 62.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Plotvirus Plotvirus plot

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;