RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA235310" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA235310 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20768895 20768895 PRJNA235310_P_NODE_3797_length_194_cov_1.075862_g3771_i0 PRJNA235310 3797 194 1.075862 2.08717228 uncultured Poseidoniia archaeon 1697135 Archaea Archaea 56.5 0.001   NTclustered gi|730903838|gb|KP211909.1| 1697135 g3771 i0 90.476 0.216494845360825 42 4 22 0 57 98 13332 13373 Uncultured Candidatus Thalassoarchaea euryarchaeote clone MedDCM-OCT2007-C1337 genomic sequence blastn 42 56.5 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia       uncultured Poseidoniia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;