RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA235310" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA235310 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6745083 6745083 PRJNA235310_P_NODE_966_length_404_cov_1.746479_g940_i0 PRJNA235310 966 404 1.746479 7.05577516 Gilbertella persicaria 101096 Fungi Fungi 54.7 0.011   NTclustered gi|2323737373|ref|XM_051581365.1| 101096 g940 i0 96.875 0.0792079207920792 32 1 8 0 68 99 139 170 Gilbertella persicaria thioredoxin-like protein (B0P05DRAFT_571298), partial mRNA blastn 32 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria
8020763 8020763 PRJNA235310_P_NODE_3247_length_211_cov_0.814815_g3221_i0 PRJNA235310 3247 211 0.814815 1.71925965 Gamsiella multidivaricata 101098 Fungi Fungi 130 8.32e-26   NTclustered gi|2323773148|ref|XM_051554468.1| 101098 g3221 i0 85.484 9.40758293838863 124 18 59 0 23 146 843 966 Gamsiella multidivaricata seryl-tRNA synthetase (BC939DRAFT_442969), mRNA blastn 1985 130 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
15670145 15670145 PRJNA235310_P_NODE_233_length_699_cov_4.423077_g212_i0 PRJNA235310 233 699 4.423077 30.91730823 Phycomyces blakesleeanus 4837 Fungi Fungi 342 3.7e-89   NTclustered gi|1069938230|ref|XM_018429293.1| 763407 g212 i0 79.707 58.9785407725322 478 93 68 4 97 572 3071 3546 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 41226 342 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
19493346 19493346 PRJNA235310_P_NODE_5396_length_167_cov_0.881356_g5370_i0 PRJNA235310 5396 167 0.881356 1.47186452 Gilbertella persicaria 101096 Fungi Fungi 84.2 4.97e-12   NTclustered gi|2323761453|ref|XM_051580004.1| 101096 g5370 i0 87.671 0.437125748502994 73 7 43 2 26 97 530 601 Gilbertella persicaria 40S ribosomal protein S22-A (B0P05DRAFT_557314), mRNA blastn 73 84.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria
22043923 22043923 PRJNA235310_P_NODE_2178_length_265_cov_0.902778_g2152_i0 PRJNA235310 2178 265 0.902778 2.3923617 Mucor mucedo 29922 Fungi Fungi 152 2.3199999999999995e-32   NTclustered gi|2324073097|ref|XM_051606541.1| 29922 g2152 i0 81.095 46.822641509434 201 29 75 7 3 200 573 767 Mucor mucedo glyceraldehyde-3-phosphate dehydrogenase 1 (EV154DRAFT_577897), mRNA blastn 12408 152 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
22043980 22043980 PRJNA235310_P_NODE_5678_length_165_cov_1.344828_g5652_i0 PRJNA235310 5678 165 1.344828 2.2189662 Radiomyces spectabilis 64574 Fungi Fungi 93.5 8.13e-15   NTclustered gi|2323718658|ref|XM_051562801.1| 64574 g5652 i0 100 46.1636363636364 50 0 30 0 114 163 574 525 Radiomyces spectabilis ubiquitin-related domain-containing protein (BYT42DRAFT_271756), mRNA blastn 7617 93.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
23319376 23319376 PRJNA235310_P_NODE_1759_length_301_cov_1.892857_g1733_i0 PRJNA235310 1759 301 1.892857 5.69749957 Mucor mucedo 29922 Fungi Fungi 117 9.79e-22   NTclustered gi|2324032737|ref|XM_051605504.1| 29922 g1733 i0 77.665 3.42857142857143 197 41 65 3 51 246 476 282 Mucor mucedo ribosomal protein L6e-domain-containing protein (EV154DRAFT_558689), partial mRNA blastn 1032 117 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;