RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA235310" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA235310 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2331908 2331908 PRJNA235310_P_NODE_5082_length_168_cov_0.873950_g5056_i0 PRJNA235310 5082 168 0.87395 1.468236 root 1 Root_unresolved Root_unresolved 60.2 8.43e-5   NTclustered gi|2917940693|emb|OZ237556.1| 6108 g5056 i0 97.143 20.452380952381 35 1 21 0 52 86 15193542 15193576 Anemonia sulcata genome assembly, chromosome: 2 blastn 3436 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
4194499 4194499 PRJNA235310_P_NODE_704_length_464_cov_2.944578_g678_i0 PRJNA235310 704 464 2.944578 13.66284192 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 311 6.73e-80   NTclustered gi|2518991437|ref|XM_057446583.1| 13093 g678 i0 82.955 80.9870689655172 352 52 75 7 100 447 511 164 PREDICTED: Hydractinia symbiolongicarpus ubiquitin-60S ribosomal protein L40 (LOC130636750), mRNA blastn 37578 311 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
6745044 6745044 PRJNA235310_P_NODE_4266_length_181_cov_1.636364_g4240_i0 PRJNA235310 4266 181 1.636364 2.96181884 Nemalecium lighti 1769417 Cnidaria other_Eukaryota 226 8.559999999999998e-55   NTclustered gi|1560754672|gb|MH155664.1| 1769417 g4240 i0 89.773 79.4806629834254 176 18 97 0 4 179 344 169 Nemalecium lighti isolate NBE08-1949 calmodulin gene, partial cds blastn 14386 226 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Haleciidae Nemalecium Nemalecium lighti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;