contig_metadata
56 rows where analysis = "blastn", bioproject = "PRJNA229468" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 367286 | 367286 | PRJNA229468_S_NODE_121_length_454_cov_2.520988_g108_i0 | PRJNA229468 | 121 | 454 | 2.520988 | 11.44528552 | uncultured bacterium | 77133 | Bacteria | Bacteria | 806 | 0 | NTclustered | gi|643429488|gb|KF109158.1| | 77133 | g108 | i0 | 98.681 | 101.645374449339 | 455 | 5 | 100 | 1 | 1 | 454 | 816 | 362 | Uncultured bacterium clone nck343f09c1 16S ribosomal RNA gene, partial sequence | blastn | 46147 | 806 | 1 | Bacteria | uncultured bacterium | ||||||||
| 367287 | 367287 | PRJNA229468_S_NODE_1261_length_161_cov_0.901786_g1248_i0 | PRJNA229468 | 1261 | 161 | 0.901786 | 1.45187546 | Sphingomonas kaistensis | 298708 | Bacteria | Bacteria | 281 | 1.57e-71 | NTclustered | gi|2688290521|gb|CP145607.1| | 298708 | g1248 | i0 | 98.137 | 1 | 161 | 3 | 100 | 0 | 1 | 161 | 2723996 | 2724156 | Sphingomonas kaistensis strain MA4R chromosome, complete genome | blastn | 161 | 281 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas kaistensis | ||
| 1056633 | 1056633 | PRJNA229468_S_NODE_961_length_173_cov_1.233871_g948_i0 | PRJNA229468 | 961 | 173 | 1.233871 | 2.13459683 | Rothia | 32207 | Bacteria | Bacteria | 320 | 3.61e-83 | NTclustered | gi|1247210625|gb|CP023510.1| | 43675 | g948 | i0 | 100 | 291.132947976879 | 173 | 0 | 100 | 0 | 1 | 173 | 652615 | 652443 | Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome | blastn | 50366 | 320 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia mucilaginosa | ||
| 4884545 | 4884545 | PRJNA229468_S_NODE_644_length_203_cov_0.948052_g631_i0 | PRJNA229468 | 644 | 203 | 0.948052 | 1.92454556 | Micrococcales | 85006 | Bacteria | Bacteria | 326 | 9.44e-85 | NTclustered | gi|1247210625|gb|CP023510.1| | 43675 | g631 | i0 | 95.567 | 360.162561576355 | 203 | 9 | 100 | 0 | 1 | 203 | 652910 | 653112 | Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome | blastn | 73113 | 326 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia mucilaginosa | ||
| 6159313 | 6159313 | PRJNA229468_S_NODE_25_length_862_cov_18.254613_g21_i0 | PRJNA229468 | 25 | 862 | 18.254613 | 157.35476406 | Escherichia | 561 | Bacteria | Bacteria | 1592 | 0 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g21 | i0 | 100 | 669.966357308585 | 862 | 0 | 100 | 0 | 1 | 862 | 3418530 | 3419391 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 577511 | 1592 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 8020686 | 8020686 | PRJNA229468_S_NODE_1007_length_170_cov_1.264463_g994_i0 | PRJNA229468 | 1007 | 170 | 1.264463 | 2.1495871 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 300 | 4.6e-77 | NTclustered | gi|1723592958|emb|LR584267.1| | 1528099 | g994 | i0 | 98.256 | 276.317647058824 | 172 | 1 | 100 | 1 | 1 | 170 | 552297 | 552468 | Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1 | blastn | 46974 | 300 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 8020687 | 8020687 | PRJNA229468_S_NODE_287_length_292_cov_1.263374_g274_i0 | PRJNA229468 | 287 | 292 | 1.263374 | 3.68905208 | Arthrobacter dokdonellae | 2211210 | Bacteria | Bacteria | 510 | 3.71e-140 | NTclustered | gi|1409665507|gb|CP029642.1| | 2211210 | g274 | i0 | 98.282 | 458.366438356164 | 291 | 5 | 99 | 0 | 2 | 292 | 551070 | 550780 | Arthrobacter dokdonellae, complete genome | blastn | 133843 | 510 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Arthrobacter | Arthrobacter dokdonellae | ||
| 8709270 | 8709270 | PRJNA229468_S_NODE_1247_length_161_cov_0.910714_g1234_i0 | PRJNA229468 | 1247 | 161 | 0.910714 | 1.46624954 | Pseudomonas | 286 | Bacteria | Bacteria | 287 | 3.37e-73 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g1234 | i0 | 98.758 | 391.074534161491 | 161 | 2 | 100 | 0 | 1 | 161 | 1238424 | 1238264 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 62963 | 287 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 8709271 | 8709271 | PRJNA229468_S_NODE_227_length_325_cov_6.072464_g214_i0 | PRJNA229468 | 227 | 325 | 6.072464 | 19.735508 | Nevskia | 64001 | Bacteria | Bacteria | 590 | 5.2299999999999986e-164 | NTclustered | gi|698326618|gb|KM851476.1| | 77133 | g214 | i0 | 99.385 | 98.6153846153846 | 325 | 2 | 100 | 0 | 1 | 325 | 11 | 335 | Uncultured bacterium clone LIB055_C_H07 16S ribosomal RNA gene, partial sequence | blastn | 32050 | 590 | 1 | Bacteria | uncultured bacterium | ||||||||
| 9984667 | 9984667 | PRJNA229468_S_NODE_528_length_218_cov_2.106509_g515_i0 | PRJNA229468 | 528 | 218 | 2.106509 | 4.59218962 | Pseudogemmobacter | 2663134 | Bacteria | Bacteria | 359 | 1.01e-94 | NTclustered | gi|1382845068|gb|CP020470.1| | 1075 | g515 | i0 | 96.33 | 186.97247706422 | 218 | 8 | 100 | 0 | 1 | 218 | 2473045 | 2473262 | Fuscovulum blasticum strain 28/5 chromosome, complete genome | blastn | 40760 | 359 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Pseudogemmobacter | Pseudogemmobacter blasticus | ||
| 10571337 | 10571337 | PRJNA229468_S_NODE_429_length_239_cov_1.800000_g416_i0 | PRJNA229468 | 429 | 239 | 1.8 | 4.302 | Paroceanicella profunda | 2579971 | Bacteria | Bacteria | 355 | 1.46e-93 | NTclustered | gi|1707807931|gb|CP040819.1| | 2579971 | g416 | i0 | 94.397 | 148.384937238494 | 232 | 11 | 97 | 2 | 1 | 231 | 538454 | 538684 | Paroceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence | blastn | 35464 | 355 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paroceanicella | Paroceanicella profunda | ||
| 10571339 | 10571339 | PRJNA229468_S_NODE_629_length_204_cov_1.787097_g616_i0 | PRJNA229468 | 629 | 204 | 1.787097 | 3.64567788 | Caulobacter vibrioides | 155892 | Bacteria | Bacteria | 377 | 2.59e-100 | NTclustered | gi|2513399286|emb|OX638199.1| | 155892 | g616 | i0 | 100 | 161.975490196078 | 204 | 0 | 100 | 0 | 1 | 204 | 3625192 | 3625395 | MAG: Caulobacter vibrioides isolate c1db9d16-026a-43e8-9d2b-e4c5db0a04e5 genome assembly, chromosome: 1 | blastn | 33043 | 377 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Caulobacter | Caulobacter vibrioides | ||
| 11259789 | 11259789 | PRJNA229468_S_NODE_1149_length_164_cov_1.208696_g1136_i0 | PRJNA229468 | 1149 | 164 | 1.208696 | 1.98226144 | Corynebacterium | 1716 | Bacteria | Bacteria | 272 | 9.65e-69 | NTclustered | gi|2212856580|gb|CP051667.1| | 37637 | g1136 | i0 | 96.933 | 323.018292682927 | 163 | 3 | 100 | 2 | 4 | 164 | 1103762 | 1103600 | Corynebacterium pseudodiphtheriticum strain 10700 chromosome | blastn | 52975 | 272 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium pseudodiphtheriticum | ||
| 11259790 | 11259790 | PRJNA229468_S_NODE_1169_length_163_cov_2.421053_g1156_i0 | PRJNA229468 | 1169 | 163 | 2.421053 | 3.94631639 | Paenibacillus | 44249 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|1240338366|gb|MF872593.1| | 58172 | g1156 | i0 | 100 | 226 | 163 | 0 | 100 | 0 | 1 | 163 | 1342 | 1180 | Paenibacillus sp. strain 16H1F15 16S ribosomal RNA gene, partial sequence | blastn | 36838 | 302 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus sp. | ||
| 11259791 | 11259791 | PRJNA229468_S_NODE_129_length_424_cov_2.952000_g116_i0 | PRJNA229468 | 129 | 424 | 2.952 | 12.51648 | Pandoraea | 93217 | Bacteria | Bacteria | 778 | 0 | NTclustered | gi|1008420858|gb|CP007506.3| | 93220 | g116 | i0 | 99.764 | 268.507075471698 | 424 | 1 | 100 | 0 | 1 | 424 | 1076014 | 1075591 | Pandoraea pnomenusa strain RB38 chromosome, complete genome | blastn | 113847 | 778 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Pandoraea | Pandoraea pnomenusa | ||
| 11259793 | 11259793 | PRJNA229468_S_NODE_449_length_234_cov_1.578378_g436_i0 | PRJNA229468 | 449 | 234 | 1.578378 | 3.69340452 | Paenibacillus | 44249 | Bacteria | Bacteria | 431 | 2.3e-116 | NTclustered | gi|686561105|gb|CP009428.1| | 189426 | g436 | i0 | 100 | 965.32905982906 | 233 | 0 | 99 | 0 | 1 | 233 | 14719 | 14951 | Paenibacillus odorifer strain DSM 15391, complete genome | blastn | 225887 | 431 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus odorifer | ||
| 11845848 | 11845848 | PRJNA229468_S_NODE_410_length_245_cov_1.193878_g397_i0 | PRJNA229468 | 410 | 245 | 1.193878 | 2.9250011 | Sphingomonas guangdongensis | 1141890 | Bacteria | Bacteria | 387 | 5.34e-103 | NTclustered | gi|959495012|ref|NR_133863.1| | 1141890 | g397 | i0 | 95.161 | 99.8448979591837 | 248 | 6 | 99 | 6 | 2 | 245 | 265 | 20 | Sphingomonas guangdongensis strain 9NM-8 16S ribosomal RNA, partial sequence | blastn | 24462 | 387 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas guangdongensis | ||
| 11845854 | 11845854 | PRJNA229468_S_NODE_850_length_181_cov_1.545455_g837_i0 | PRJNA229468 | 850 | 181 | 1.545455 | 2.79727355 | Neotabrizicola shimadae | 2807096 | Bacteria | Bacteria | 268 | 1.3999999999999999e-67 | NTclustered | gi|2081593300|gb|CP069370.1| | 2807096 | g837 | i0 | 93.37 | 150.635359116022 | 181 | 12 | 100 | 0 | 1 | 181 | 2913230 | 2913050 | Neotabrizicola shimadae strain N10 chromosome, complete genome | blastn | 27265 | 268 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Neotabrizicola | Neotabrizicola shimadae | ||
| 12535168 | 12535168 | PRJNA229468_S_NODE_1010_length_170_cov_1.198347_g997_i0 | PRJNA229468 | 1010 | 170 | 1.198347 | 2.0371899 | root | 1 | Root_unresolved | Root_unresolved | 315 | 1.64e-81 | NTclustered | gi|238337191|gb|GQ101014.1| | 77133 | g997 | i0 | 100 | 106 | 170 | 0 | 100 | 0 | 1 | 170 | 698 | 529 | Uncultured bacterium clone nbw489e09c1 16S ribosomal RNA gene, partial sequence | blastn | 18020 | 315 | 1 | Bacteria | uncultured bacterium | ||||||||
| 12535169 | 12535169 | PRJNA229468_S_NODE_1050_length_167_cov_1.355932_g1037_i0 | PRJNA229468 | 1050 | 167 | 1.355932 | 2.26440644 | Acinetobacter | 469 | Bacteria | Bacteria | 303 | 3.5e-78 | NTclustered | gi|1958425625|gb|CP068206.1| | 40214 | g1037 | i0 | 100 | 675.520958083832 | 164 | 0 | 100 | 0 | 1 | 164 | 469507 | 469670 | Acinetobacter johnsonii strain FDAARGOS_1092 chromosome, complete genome | blastn | 112812 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 12535171 | 12535171 | PRJNA229468_S_NODE_1170_length_163_cov_2.061404_g1157_i0 | PRJNA229468 | 1170 | 163 | 2.061404 | 3.36008852 | Moraxellaceae | 468 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|2593446548|gb|OR699078.1| | 479 | g1157 | i0 | 100 | 290.024539877301 | 163 | 0 | 100 | 0 | 1 | 163 | 614 | 776 | Moraxella sp. strain Hz 62-2 23S ribosomal RNA gene, partial sequence | blastn | 47274 | 302 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Moraxella | Moraxella sp. | ||
| 12535172 | 12535172 | PRJNA229468_S_NODE_210_length_332_cov_7.409894_g197_i0 | PRJNA229468 | 210 | 332 | 7.409894 | 24.60084808 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 614 | 3.1799999999999995e-171 | NTclustered | gi|1811468835|gb|MT101737.1| | 306 | g197 | i0 | 100 | 132.009036144578 | 332 | 0 | 100 | 0 | 1 | 332 | 16 | 347 | Pseudomonas sp. strain MWU13-2517 16S ribosomal RNA gene, partial sequence | blastn | 43827 | 614 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. | ||
| 13121081 | 13121081 | PRJNA229468_S_NODE_51_length_656_cov_5.415157_g44_i0 | PRJNA229468 | 51 | 656 | 5.415157 | 35.52342992 | Pseudomonas sp. Seg1 | 2678259 | Bacteria | Bacteria | 1195 | 0 | NTclustered | gi|2030790783|dbj|AP021903.1| | 2678259 | g44 | i0 | 99.543 | 528.003048780488 | 656 | 3 | 100 | 0 | 1 | 656 | 871253 | 870598 | Pseudomonas sp. Seg1 DNA, complete genome | blastn | 346370 | 1195 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. Seg1 | ||
| 13121085 | 13121085 | PRJNA229468_S_NODE_971_length_172_cov_1.886179_g958_i0 | PRJNA229468 | 971 | 172 | 1.886179 | 3.24422788 | Acinetobacter johnsonii | 40214 | Bacteria | Bacteria | 313 | 5.989999999999998e-81 | NTclustered | gi|1588041121|gb|CP037424.1| | 40214 | g958 | i0 | 99.419 | 644.075581395349 | 172 | 1 | 100 | 0 | 1 | 172 | 2053743 | 2053914 | Acinetobacter johnsonii strain M19 chromosome, complete genome | blastn | 110781 | 313 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 13809992 | 13809992 | PRJNA229468_S_NODE_1231_length_162_cov_0.902655_g1218_i0 | PRJNA229468 | 1231 | 162 | 0.902655 | 1.4623011 | Bacillales | 1385 | Bacteria | Bacteria | 294 | 2.03e-75 | NTclustered | gi|2264387772|gb|CP015553.1| | 1281 | g1218 | i0 | 99.383 | 486.006172839506 | 162 | 1 | 100 | 0 | 1 | 162 | 124482 | 124321 | Staphylococcus carnosus strain TMW 2.1596 chromosome, complete genome | blastn | 78733 | 294 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus carnosus | ||
| 13809993 | 13809993 | PRJNA229468_S_NODE_131_length_419_cov_4.645946_g118_i0 | PRJNA229468 | 131 | 419 | 4.645946 | 19.46651374 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 774 | 0 | NTclustered | gi|2643672927|gb|CP133209.1| | 294 | g118 | i0 | 100 | 541.081145584726 | 419 | 0 | 100 | 0 | 1 | 419 | 2548 | 2966 | Pseudomonas fluorescens strain CFBP2392 chromosome, complete genome | blastn | 226713 | 774 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 13809994 | 13809994 | PRJNA229468_S_NODE_611_length_207_cov_0.955696_g598_i0 | PRJNA229468 | 611 | 207 | 0.955696 | 1.97829072 | Modestobacter | 88138 | Bacteria | Bacteria | 363 | 7.369999999999998e-96 | NTclustered | gi|470491309|ref|NR_077032.1| | 477641 | g598 | i0 | 99.01 | 379.289855072464 | 202 | 2 | 98 | 0 | 1 | 202 | 1018 | 817 | Modestobacter marinus strain BC501 23S ribosomal RNA, complete sequence | blastn | 78513 | 363 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Geodermatophilales | Geodermatophilaceae | Modestobacter | Modestobacter marinus | ||
| 15670086 | 15670086 | PRJNA229468_S_NODE_133_length_416_cov_2.623978_g120_i0 | PRJNA229468 | 133 | 416 | 2.623978 | 10.91574848 | Nevskia ramosa | 64002 | Bacteria | Bacteria | 708 | 0 | NTclustered | gi|1004607053|gb|KT865761.1| | 64002 | g120 | i0 | 97.356 | 204.891826923077 | 416 | 11 | 100 | 0 | 1 | 416 | 1503 | 1088 | Nevskia ramosa strain DSM 11499 23S ribosomal RNA gene, partial sequence | blastn | 85235 | 708 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Nevskiales | Nevskiaceae | Nevskia | Nevskia ramosa | ||
| 15670088 | 15670088 | PRJNA229468_S_NODE_233_length_322_cov_1.065934_g220_i0 | PRJNA229468 | 233 | 322 | 1.065934 | 3.43230748 | uncultured bacterium | 77133 | Bacteria | Bacteria | 475 | 1.51e-129 | NTclustered | gi|643418490|gb|KF098178.1| | 77133 | g220 | i0 | 93.458 | 98.9378881987578 | 321 | 20 | 99 | 1 | 1 | 321 | 380 | 61 | Uncultured bacterium clone ncd1392f03c2 16S ribosomal RNA gene, partial sequence | blastn | 31858 | 475 | 1 | Bacteria | uncultured bacterium | ||||||||
| 15670093 | 15670093 | PRJNA229468_S_NODE_713_length_195_cov_1.527397_g700_i0 | PRJNA229468 | 713 | 195 | 1.527397 | 2.97842415 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 333 | 5.369999999999999e-87 | NTclustered | gi|2202949261|emb|OV972893.1| | 3107663 | g700 | i0 | 97.436 | 614.671794871795 | 195 | 5 | 100 | 0 | 1 | 195 | 5033557 | 5033751 | MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 | blastn | 119861 | 333 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 16358984 | 16358984 | PRJNA229468_S_NODE_573_length_212_cov_2.306748_g560_i0 | PRJNA229468 | 573 | 212 | 2.306748 | 4.89030576 | root | 1 | Root_unresolved | Root_unresolved | 392 | 9.67e-105 | NTclustered | gi|1152261174|gb|KU978308.1| | 77133 | g560 | i0 | 100 | 109 | 212 | 0 | 100 | 0 | 1 | 212 | 1263 | 1474 | Uncultured bacterium clone EHB-P0848 #02 16S ribosomal RNA gene, partial sequence | blastn | 23108 | 392 | 1 | Bacteria | uncultured bacterium | ||||||||
| 16358985 | 16358985 | PRJNA229468_S_NODE_893_length_178_cov_1.558140_g880_i0 | PRJNA229468 | 893 | 178 | 1.55814 | 2.7734892 | Acinetobacter | 469 | Bacteria | Bacteria | 329 | 6.21e-86 | NTclustered | gi|2456158263|gb|CP119200.1| | 40214 | g880 | i0 | 100 | 640.533707865169 | 178 | 0 | 100 | 0 | 1 | 178 | 167112 | 166935 | Acinetobacter johnsonii strain AJ572 chromosome, complete genome | blastn | 114015 | 329 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 16944567 | 16944567 | PRJNA229468_S_NODE_174_length_361_cov_1.634615_g161_i0 | PRJNA229468 | 174 | 361 | 1.634615 | 5.90096015 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 592 | 1.6299999999999996e-164 | NTclustered | gi|2202949261|emb|OV972893.1| | 3107663 | g161 | i0 | 96.143 | 543.487534626039 | 363 | 12 | 100 | 2 | 1 | 361 | 5032293 | 5032655 | MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 | blastn | 196199 | 592 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 16944573 | 16944573 | PRJNA229468_S_NODE_874_length_179_cov_1.915385_g861_i0 | PRJNA229468 | 874 | 179 | 1.915385 | 3.42853915 | Neotabrizicola shimadae | 2807096 | Bacteria | Bacteria | 309 | 8.15e-80 | NTclustered | gi|2081593300|gb|CP069370.1| | 2807096 | g861 | i0 | 97.765 | 189.782122905028 | 179 | 4 | 100 | 0 | 1 | 179 | 2913819 | 2913641 | Neotabrizicola shimadae strain N10 chromosome, complete genome | blastn | 33971 | 309 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Neotabrizicola | Neotabrizicola shimadae | ||
| 17634186 | 17634186 | PRJNA229468_S_NODE_454_length_232_cov_2.393443_g441_i0 | PRJNA229468 | 454 | 232 | 2.393443 | 5.55278776 | Bradyrhizobium | 374 | Bacteria | Bacteria | 429 | 8.2e-116 | NTclustered | gi|2484553652|gb|CP121667.1| | 280333 | g441 | i0 | 100 | 124.724137931034 | 232 | 0 | 100 | 0 | 1 | 232 | 1249687 | 1249456 | Bradyrhizobium pachyrhizi strain CB1923 chromosome, complete genome | blastn | 28936 | 429 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium pachyrhizi | ||
| 17634189 | 17634189 | PRJNA229468_S_NODE_834_length_182_cov_1.646617_g821_i0 | PRJNA229468 | 834 | 182 | 1.646617 | 2.99684294 | Arthrobacter | 1663 | Bacteria | Bacteria | 320 | 3.84e-83 | NTclustered | gi|2921126289|gb|CP102608.1| | 619291 | g821 | i0 | 98.352 | 428.796703296703 | 182 | 3 | 100 | 0 | 1 | 182 | 459346 | 459165 | Arthrobacter sp. N1 chromosome, complete genome | blastn | 78041 | 320 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Arthrobacter | Arthrobacter sp. N1 | ||
| 18218950 | 18218950 | PRJNA229468_S_NODE_475_length_228_cov_1.234637_g462_i0 | PRJNA229468 | 475 | 228 | 1.234637 | 2.81497236 | uncultured bacterium | 77133 | Bacteria | Bacteria | 416 | 6.259999999999998e-112 | NTclustered | gi|440498561|gb|JX395008.1| | 77133 | g462 | i0 | 99.561 | 101 | 228 | 1 | 100 | 0 | 1 | 228 | 47 | 274 | Uncultured bacterium clone NYS000808 16S ribosomal RNA gene, partial sequence | blastn | 23028 | 416 | 1 | Bacteria | uncultured bacterium | ||||||||
| 18908029 | 18908029 | PRJNA229468_S_NODE_175_length_360_cov_2.954984_g162_i0 | PRJNA229468 | 175 | 360 | 2.954984 | 10.6379424 | Janthinobacterium | 29580 | Bacteria | Bacteria | 660 | 0 | NTclustered | gi|1245314810|gb|CP023422.1| | 368607 | g162 | i0 | 99.722 | 550.130555555556 | 360 | 1 | 100 | 0 | 1 | 360 | 208423 | 208064 | Janthinobacterium svalbardensis strain PAMC 27463 chromosome, complete genome | blastn | 198047 | 660 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Janthinobacterium | Janthinobacterium svalbardensis | ||
| 18908030 | 18908030 | PRJNA229468_S_NODE_535_length_216_cov_1.526946_g522_i0 | PRJNA229468 | 535 | 216 | 1.526946 | 3.29820336 | Ralstonia | 48736 | Bacteria | Bacteria | 399 | 5.909999999999999e-107 | NTclustered | gi|2209824596|gb|CP093304.1| | 190721 | g522 | i0 | 100 | 179.00462962963 | 216 | 0 | 100 | 0 | 1 | 216 | 1753465 | 1753250 | Ralstonia insidiosa strain 15-1563-3 chromosome 2, complete sequence | blastn | 38665 | 399 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia insidiosa | ||
| 19493238 | 19493238 | PRJNA229468_S_NODE_1016_length_169_cov_2.775000_g1003_i0 | PRJNA229468 | 1016 | 169 | 2.775 | 4.68975 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 252 | 1.3e-62 | NTclustered | gi|2202949261|emb|OV972893.1| | 3107663 | g1003 | i0 | 93.529 | 700.585798816568 | 170 | 10 | 100 | 1 | 1 | 169 | 5031878 | 5032047 | MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 | blastn | 118399 | 252 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 19493244 | 19493244 | PRJNA229468_S_NODE_1256_length_161_cov_0.910714_g1243_i0 | PRJNA229468 | 1256 | 161 | 0.910714 | 1.46624954 | uncultured bacterium | 77133 | Bacteria | Bacteria | 287 | 3.37e-73 | NTclustered | gi|529155960|gb|KF145299.1| | 77133 | g1243 | i0 | 98.765 | 103.372670807453 | 162 | 1 | 100 | 1 | 1 | 161 | 283 | 444 | Uncultured bacterium clone S1P2039 16S ribosomal RNA gene, partial sequence | blastn | 16643 | 287 | 1 | Bacteria | uncultured bacterium | ||||||||
| 20182616 | 20182616 | PRJNA229468_S_NODE_556_length_213_cov_15.201220_g543_i0 | PRJNA229468 | 556 | 213 | 15.20122 | 32.3785986 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 394 | 2.7e-105 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g543 | i0 | 100 | 669.234741784038 | 213 | 0 | 100 | 0 | 1 | 213 | 186534 | 186322 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 142547 | 394 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 21458300 | 21458300 | PRJNA229468_S_NODE_337_length_271_cov_3.707207_g324_i0 | PRJNA229468 | 337 | 271 | 3.707207 | 10.04653097 | Pandoraea | 93217 | Bacteria | Bacteria | 494 | 3.44e-135 | NTclustered | gi|662020077|ref|NR_121964.1| | 93220 | g324 | i0 | 99.63 | 294.911439114391 | 270 | 1 | 99 | 0 | 1 | 270 | 2604 | 2873 | Pandoraea pnomenusa strain 3kgm 23S ribosomal RNA gene, complete sequence | blastn | 79921 | 494 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Pandoraea | Pandoraea pnomenusa | ||
| 21458301 | 21458301 | PRJNA229468_S_NODE_357_length_265_cov_2.222222_g344_i0 | PRJNA229468 | 357 | 265 | 2.222222 | 5.8888883 | Cutibacterium | 1912216 | Bacteria | Bacteria | 490 | 4.3299999999999986e-134 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g344 | i0 | 100 | 268.256603773585 | 265 | 0 | 100 | 0 | 1 | 265 | 56512 | 56248 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 71088 | 490 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 22043869 | 22043869 | PRJNA229468_S_NODE_258_length_311_cov_2.286260_g245_i0 | PRJNA229468 | 258 | 311 | 2.28626 | 7.1102686 | Nevskia ramosa | 64002 | Bacteria | Bacteria | 569 | 6.489999999999998e-158 | NTclustered | gi|1004607053|gb|KT865761.1| | 64002 | g245 | i0 | 99.678 | 246.131832797428 | 311 | 1 | 100 | 0 | 1 | 311 | 1490 | 1800 | Nevskia ramosa strain DSM 11499 23S ribosomal RNA gene, partial sequence | blastn | 76547 | 569 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Nevskiales | Nevskiaceae | Nevskia | Nevskia ramosa | ||
| 22043870 | 22043870 | PRJNA229468_S_NODE_598_length_209_cov_2.018750_g585_i0 | PRJNA229468 | 598 | 209 | 2.01875 | 4.2191875 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 287 | 4.61e-73 | NTclustered | gi|2202949261|emb|OV972893.1| | 3107663 | g585 | i0 | 91.429 | 405.832535885167 | 210 | 16 | 100 | 2 | 1 | 209 | 5033288 | 5033496 | MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 | blastn | 84819 | 287 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 22043872 | 22043872 | PRJNA229468_S_NODE_658_length_202_cov_1.000000_g645_i0 | PRJNA229468 | 658 | 202 | 1 | 2.02 | Undibacterium cyanobacteriorum | 3073561 | Bacteria | Bacteria | 351 | 1.55e-92 | NTclustered | gi|2575695762|gb|CP133720.1| | 3073561 | g645 | i0 | 98.02 | 415.717821782178 | 202 | 4 | 100 | 0 | 1 | 202 | 740511 | 740310 | Undibacterium cyanobacteriorum strain 20NA77.5 chromosome, complete genome | blastn | 83975 | 351 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium cyanobacteriorum | ||
| 22733343 | 22733343 | PRJNA229468_S_NODE_1298_length_156_cov_2.065421_g1285_i0 | PRJNA229468 | 1298 | 156 | 2.065421 | 3.22205676 | Janthinobacterium | 29580 | Bacteria | Bacteria | 283 | 4.1899999999999994e-72 | NTclustered | gi|1245314810|gb|CP023422.1| | 368607 | g1285 | i0 | 99.359 | 484.50641025641 | 156 | 1 | 100 | 0 | 1 | 156 | 1051565 | 1051720 | Janthinobacterium svalbardensis strain PAMC 27463 chromosome, complete genome | blastn | 75583 | 283 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Janthinobacterium | Janthinobacterium svalbardensis | ||
| 22733344 | 22733344 | PRJNA229468_S_NODE_38_length_727_cov_4.001475_g32_i0 | PRJNA229468 | 38 | 727 | 4.001475 | 29.09072325 | Cutibacterium | 1912216 | Bacteria | Bacteria | 1343 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g32 | i0 | 100 | 282.95598349381 | 727 | 0 | 100 | 0 | 1 | 727 | 56164 | 55438 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 205709 | 1343 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 22733347 | 22733347 | PRJNA229468_S_NODE_578_length_212_cov_1.134969_g565_i0 | PRJNA229468 | 578 | 212 | 1.134969 | 2.40613428 | Acidovorax | 12916 | Bacteria | Bacteria | 342 | 9.879999999999999e-90 | NTclustered | gi|1004607049|gb|KT865757.1| | 12917 | g565 | i0 | 95.775 | 254.660377358491 | 213 | 7 | 100 | 2 | 1 | 212 | 86 | 297 | Acidovorax facilis strain DSM 649 23S ribosomal RNA gene, partial sequence | blastn | 53988 | 342 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax facilis | ||
| 23319334 | 23319334 | PRJNA229468_S_NODE_1139_length_165_cov_0.775862_g1126_i0 | PRJNA229468 | 1139 | 165 | 0.775862 | 1.2801723 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 213 | 5.98e-51 | NTclustered | gi|2202949261|emb|OV972893.1| | 3107663 | g1126 | i0 | 91.139 | 386.018181818182 | 158 | 12 | 96 | 1 | 8 | 165 | 5032914 | 5033069 | MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 | blastn | 63693 | 213 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 24008524 | 24008524 | PRJNA229468_S_NODE_139_length_410_cov_1.637119_g126_i0 | PRJNA229468 | 139 | 410 | 1.637119 | 6.7121879 | Paenibacillus | 44249 | Bacteria | Bacteria | 747 | 0 | NTclustered | gi|686522490|gb|CP009281.1| | 1536770 | g126 | i0 | 99.512 | 1055.00731707317 | 410 | 2 | 100 | 0 | 1 | 410 | 15308 | 15717 | Paenibacillus sp. FSL R5-0345, complete genome | blastn | 432553 | 747 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus sp. FSL R5-0345 | ||
| 24008525 | 24008525 | PRJNA229468_S_NODE_539_length_216_cov_0.916168_g526_i0 | PRJNA229468 | 539 | 216 | 0.916168 | 1.97892288 | Hyphomicrobiales | 356 | Bacteria | Bacteria | 139 | 1.42e-28 | NTclustered | gi|1973548085|gb|CP063362.1| | 2528964 | g526 | i0 | 80.556 | 6.08796296296296 | 180 | 35 | 83 | 0 | 22 | 201 | 4958646 | 4958467 | Xanthobacter dioxanivorans strain YN2 chromosome, complete genome | blastn | 1315 | 139 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Xanthobacteraceae | Xanthobacter | Xanthobacter dioxanivorans | ||
| 24008526 | 24008526 | PRJNA229468_S_NODE_739_length_191_cov_0.894366_g726_i0 | PRJNA229468 | 739 | 191 | 0.894366 | 1.70823906 | Streptococcus | 1301 | Bacteria | Bacteria | 353 | 4.02e-93 | NTclustered | gi|1782758915|gb|CP018189.1| | 1304 | g726 | i0 | 100 | 617.952879581152 | 191 | 0 | 100 | 0 | 1 | 191 | 17677 | 17487 | Streptococcus salivarius strain ICDC3 chromosome, complete genome | blastn | 118029 | 353 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus salivarius | ||
| 25282653 | 25282653 | PRJNA229468_S_NODE_20_length_915_cov_3.091224_g16_i0 | PRJNA229468 | 20 | 915 | 3.091224 | 28.2846996 | Cutibacterium | 1912216 | Bacteria | Bacteria | 1674 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g16 | i0 | 99.672 | 280.55737704918 | 915 | 3 | 100 | 0 | 1 | 915 | 56490 | 57404 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 256710 | 1674 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 25282659 | 25282659 | PRJNA229468_S_NODE_920_length_176_cov_1.960630_g907_i0 | PRJNA229468 | 920 | 176 | 1.96063 | 3.4507088 | root | 1 | Root_unresolved | Root_unresolved | 326 | 7.92e-85 | NTclustered | gi|2700484197|gb|CP147774.1| | 80878 | g907 | i0 | 100 | 387.005681818182 | 176 | 0 | 100 | 0 | 1 | 176 | 2502200 | 2502025 | Acidovorax temperans strain AA22 chromosome | blastn | 68113 | 326 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax temperans |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;