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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA229468" and tax_kingdom = "Fungi"

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tax_phylum 3

tax_superkingdom 1

tax_kingdom 1

  • Fungi · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA229468 · 30 ✖

analysis 1

  • blastn · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
367290 367290 PRJNA229468_S_NODE_841_length_182_cov_0.992481_g828_i0 PRJNA229468 841 182 0.992481 1.80631542 Sporobolomyces sp. 1928706 Fungi Fungi 276 8.440000000000001e-70   NTclustered gi|1976519903|gb|MT663151.1| 1928706 g828 i0 93.956 39.5879120879121 182 11 100 0 1 182 12588 12769 Sporobolomyces sp. mitochondrion, complete genome blastn 7205 276 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Sporobolomyces Sporobolomyces sp.
1056629 1056629 PRJNA229468_S_NODE_1081_length_166_cov_1.743590_g1068_i0 PRJNA229468 1081 166 1.74359 2.8943594 root 1 Root_unresolved Root_unresolved 252 1.28e-62   NTclustered gi|1206256888|emb|LT841236.1| 42551 g1068 i0 100 93.8012048192771 136 0 99 0 30 165 4696 4831 Fusarium oxysporum f. sp. dianthi partial 18S rRNA gene for 18S ribosomal RNA, strain Fod008 blastn 15571 252 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium oxysporum
1056630 1056630 PRJNA229468_S_NODE_1321_length_152_cov_2.970874_g1308_i0 PRJNA229468 1321 152 2.970874 4.51572848 Basidiomycota 5204 Fungi Fungi 281 1.46e-71   NTclustered gi|1675392|gb|U77062.1|MVU77062 5272 g1308 i0 100 100.013157894737 152 0 100 0 1 152 913 1064 Microbotryum violaceum 18S ribosomal RNA gene, complete sequence blastn 15202 281 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Microbotryales Microbotryaceae Microbotryum Microbotryum violaceum
1056631 1056631 PRJNA229468_S_NODE_581_length_212_cov_0.938650_g568_i0 PRJNA229468 581 212 0.93865 1.989938 root 1 Root_unresolved Root_unresolved 387 4.5e-103   NTclustered gi|1389182097|gb|CP029160.1| 4932 g568 i0 99.528 112.867924528302 212 1 100 0 1 212 3881942 3882153 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 23928 387 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
1642064 1642064 PRJNA229468_S_NODE_1142_length_164_cov_2.321739_g1129_i0 PRJNA229468 1142 164 2.321739 3.80765196 Curvibasidium nothofagi 114767 Fungi Fungi 279 5.77e-71   NTclustered gi|1858897335|ref|NG_069005.1| 114767 g1129 i0 100 102.170731707317 151 0 92 0 1 151 1259 1409 Curvibasidium nothofagi CBS 8166 28S rRNA gene, partial sequence; from TYPE material blastn 16756 279 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes     Curvibasidium Curvibasidium nothofagi
2331836 2331836 PRJNA229468_S_NODE_1222_length_162_cov_1.035398_g1209_i0 PRJNA229468 1222 162 1.035398 1.67734476 Sordariomycetes 147550 Fungi Fungi 233 4.49e-57   NTclustered gi|2798605368|gb|PQ285334.1| 5127 g1209 i0 99.231 80.2469135802469 130 0 80 1 34 162 136 265 Fusarium fujikuroi isolate PB33 large subunit ribosomal RNA gene, partial sequence blastn 13000 233 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium fujikuroi
2917903 2917903 PRJNA229468_S_NODE_623_length_205_cov_1.519231_g610_i0 PRJNA229468 623 205 1.519231 3.11442355 Leucosporidium sp. AY30 662878 Fungi Fungi 351 1.58e-92   NTclustered gi|254927417|gb|GQ336996.1| 662878 g610 i0 97.561 105.336585365854 205 5 100 0 1 205 4836 5040 Leucosporidium sp. AY30 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 21594 351 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium sp. AY30
6159317 6159317 PRJNA229468_S_NODE_845_length_181_cov_2.106061_g832_i0 PRJNA229468 845 181 2.106061 3.81197041 Sporidiobolaceae 1799696 Fungi Fungi 335 1.36e-87   NTclustered gi|671394780|gb|KJ806312.1| 5288 g832 i0 100 100 181 0 100 0 1 181 1374 1554 Rhodosporidium diobovatum isolate H-5 18S ribosomal RNA gene, partial sequence blastn 18100 335 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula diobovata
7434487 7434487 PRJNA229468_S_NODE_786_length_187_cov_1.108696_g773_i0 PRJNA229468 786 187 1.108696 2.07326152 Opisthokonta 33154 Fungi Fungi 346 6.56e-91   NTclustered gi|915512607|gb|KP825390.1| 76775 g773 i0 100 100 187 0 100 0 1 187 245 431 Malassezia restricta strain ISOSEB19F 28S ribosomal RNA gene, partial sequence blastn 18700 346 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
8020692 8020692 PRJNA229468_S_NODE_727_length_192_cov_4.846154_g714_i0 PRJNA229468 727 192 4.846154 9.30461568 Geastrum schmidelii 566083 Fungi Fungi 344 2.44e-90   NTclustered gi|1859735544|gb|MT644862.1| 566083 g714 i0 98.958 100.005208333333 192 2 100 0 1 192 4850 5041 Geastrum schmidelii isolate DM1180 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19201 344 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Geastrales Geastraceae Geastrum Geastrum schmidelii
8709273 8709273 PRJNA229468_S_NODE_907_length_177_cov_1.546875_g894_i0 PRJNA229468 907 177 1.546875 2.73796875 Curvibasidium 256806 Fungi Fungi 316 4.799999999999999e-82   NTclustered gi|2235263546|gb|ON428531.1| 106008 g894 i0 98.876 100.564971751412 178 1 100 1 1 177 479 302 Curvibasidium cygneicollum isolate UASWS2879 NBB-B02 large subunit ribosomal RNA gene, partial sequence blastn 17800 316 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes     Curvibasidium Curvibasidium cygneicollum
9295357 9295357 PRJNA229468_S_NODE_1108_length_166_cov_0.863248_g1095_i0 PRJNA229468 1108 166 0.863248 1.43299168 Tricharina praecox 43433 Fungi Fungi 95.3 2.28e-15   NTclustered gi|2323975453|ref|XM_051485962.1| 43433 g1095 i0 87.654 1.48192771084337 81 10 49 0 2 82 96 16 Tricharina praecox small GTP-binding protein (BZA05DRAFT_425477), partial mRNA blastn 246 95.3 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Pyronemataceae Tricharina Tricharina praecox
10571343 10571343 PRJNA229468_S_NODE_849_length_181_cov_1.590909_g836_i0 PRJNA229468 849 181 1.590909 2.87954529 Colletotrichum godetiae 1209918 Fungi Fungi 63.9 7.1e-6   NTclustered gi|2608539393|ref|XM_060566575.1| 1209918 g836 i0 95.122 0.823204419889503 41 1 22 1 20 59 2191 2231 Colletotrichum godetiae uncharacterized protein (BDP55DRAFT_295298), mRNA blastn 149 63.9 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Glomerellaceae Colletotrichum Colletotrichum godetiae
11259788 11259788 PRJNA229468_S_NODE_1029_length_168_cov_2.394958_g1016_i0 PRJNA229468 1029 168 2.394958 4.02352944 Fungi 4751 Fungi Fungi 305 9.81e-79   NTclustered gi|307707117|gb|HQ174215.1| 5507 g1016 i0 99.405 100 168 1 100 0 1 168 739 572 Fusarium oxysporum clone P10 18S ribosomal RNA gene, partial sequence blastn 16800 305 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium oxysporum
12535173 12535173 PRJNA229468_S_NODE_870_length_180_cov_0.969466_g857_i0 PRJNA229468 870 180 0.969466 1.7450388 Microbotryomycetes 162481 Fungi Fungi 333 4.87e-87   NTclustered gi|52631069|gb|AY745718.1| 5002 g857 i0 100 96.2333333333333 180 0 100 0 1 180 1052 873 Sporobolomyces johnsonii strain CBS5470 25S large subunit ribosomal RNA gene, partial sequence blastn 17322 333 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Sporobolomyces Sporobolomyces johnsonii
13809996 13809996 PRJNA229468_S_NODE_811_length_184_cov_1.622222_g798_i0 PRJNA229468 811 184 1.622222 2.98488848 Sordariomycetes 147550 Fungi Fungi 340 2.99e-89   NTclustered gi|307707117|gb|HQ174215.1| 5507 g798 i0 100 100 184 0 100 0 1 184 1589 1406 Fusarium oxysporum clone P10 18S ribosomal RNA gene, partial sequence blastn 18400 340 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium oxysporum
13809997 13809997 PRJNA229468_S_NODE_871_length_179_cov_2.423077_g858_i0 PRJNA229468 871 179 2.423077 4.33730783 Hypocreales 5125 Fungi Fungi 272 1.07e-68   NTclustered gi|1473254020|gb|MH866964.1| 5128 g858 i0 99.338 84.3575418994413 151 0 84 1 30 179 635 785 Fusarium sambucinum culture CBS:187.34 strain CBS 187.34 large subunit ribosomal RNA gene, partial sequence blastn 15100 272 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium sambucinum
15670094 15670094 PRJNA229468_S_NODE_733_length_191_cov_1.366197_g720_i0 PRJNA229468 733 191 1.366197 2.60943627 Leucosporidium sp. AY30 662878 Fungi Fungi 243 9.08e-60   NTclustered gi|254927417|gb|GQ336996.1| 662878 g720 i0 89.744 61.979057591623 195 12 100 5 1 191 5538 5728 Leucosporidium sp. AY30 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 11838 243 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium sp. AY30
18218949 18218949 PRJNA229468_S_NODE_1175_length_163_cov_1.342105_g1162_i0 PRJNA229468 1175 163 1.342105 2.18763115 Melanopsichium pennsylvanicum 63383 Fungi Fungi 121 3.669999999999999e-23   NTclustered gi|673528225|emb|HG529616.1| 1398559 g1162 i0 80.247 2.39263803680982 162 30 99 2 3 163 84093 84253 Melanopsichium pennsylvanicum 4 genomic scaffold, scaffold SCAFFOLD63 blastn 390 121 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Melanopsichium Melanopsichium pennsylvanicum
19493245 19493245 PRJNA229468_S_NODE_196_length_346_cov_2.754209_g183_i0 PRJNA229468 196 346 2.754209 9.52956314 Leucosporidium scottii 5278 Fungi Fungi 568 2.6299999999999995e-157   NTclustered gi|1358186634|gb|MH047191.1| 5278 g183 i0 96.243 108.401734104046 346 13 100 0 1 346 4230 3885 Leucosporidium scottii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 37507 568 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium scottii
19493249 19493249 PRJNA229468_S_NODE_956_length_173_cov_1.798387_g943_i0 PRJNA229468 956 173 1.798387 3.11120951 Rhodotorula glutinis 5535 Fungi Fungi 320 3.61e-83   NTclustered gi|225134685|gb|FJ345357.1| 5535 g943 i0 100 81.4682080924856 173 0 100 0 1 173 2840 2668 Rhodotorula glutinis strain ATCC 16726 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14094 320 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula glutinis
20182614 20182614 PRJNA229468_S_NODE_296_length_289_cov_1.912500_g283_i0 PRJNA229468 296 289 1.9125 5.527125 Microbotryomycetes 162481 Fungi Fungi 529 1.01e-145   NTclustered gi|2065978375|gb|MZ557051.1| 5445 g283 i0 99.654 100 289 1 100 0 1 289 48 336 Hamamotoa singularis isolate UFMGCB L82 large subunit ribosomal RNA gene, partial sequence blastn 28900 529 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes   Chrysozymaceae Hamamotoa Hamamotoa singularis
20768804 20768804 PRJNA229468_S_NODE_1057_length_167_cov_0.864407_g1044_i0 PRJNA229468 1057 167 0.864407 1.44355969 Mycotypha africana 64632 Fungi Fungi 135 1.35e-27   NTclustered gi|2432570701|ref|XM_053083359.1| 64632 g1044 i0 84.286 2.25149700598802 140 21 83 1 27 165 1397 1258 Mycotypha africana V-type proton ATPase catalytic subunit A (BDF20DRAFT_907251), partial mRNA blastn 376 135 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
20768812 20768812 PRJNA229468_S_NODE_937_length_174_cov_1.752000_g924_i0 PRJNA229468 937 174 1.752 3.04848 uncultured fungus 175245 Fungi Fungi 261 2.23e-65   NTclustered gi|2159204291|emb|OU942693.1| 175245 g924 i0 93.714 70.3965517241379 175 9 100 2 1 174 696 523 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus03987 blastn 12249 261 1 Eukaryota Opisthokonta Fungi           uncultured fungus
21458302 21458302 PRJNA229468_S_NODE_417_length_243_cov_3.056701_g404_i0 PRJNA229468 417 243 3.056701 7.42778343 Fusarium 5506 Fungi Fungi 399 6.789999999999999e-107   NTclustered gi|2798605368|gb|PQ285334.1| 5127 g404 i0 96.311 100.411522633745 244 8 100 1 1 243 197 440 Fusarium fujikuroi isolate PB33 large subunit ribosomal RNA gene, partial sequence blastn 24400 399 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium fujikuroi
22043868 22043868 PRJNA229468_S_NODE_1278_length_158_cov_3.715596_g1265_i0 PRJNA229468 1278 158 3.715596 5.87064168 Leucosporidium sp. AY30 662878 Fungi Fungi 278 1.98e-70   NTclustered gi|254927417|gb|GQ336996.1| 662878 g1265 i0 98.718 104.930379746835 156 2 99 0 1 156 5566 5411 Leucosporidium sp. AY30 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 16579 278 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium sp. AY30
23319337 23319337 PRJNA229468_S_NODE_639_length_203_cov_1.824675_g626_i0 PRJNA229468 639 203 1.824675 3.70409025 Ogataea haglerorum 1937702 Fungi Fungi 86.1 1.74e-12   NTclustered gi|2085299524|ref|XM_043196467.1| 1937702 g626 i0 86.076 0.389162561576355 79 11 39 0 95 173 204 126 Ogataea haglerorum uncharacterized protein (KL911_001501), partial mRNA blastn 79 86.1 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Ogataea Ogataea haglerorum
23319339 23319339 PRJNA229468_S_NODE_839_length_182_cov_1.406015_g826_i0 PRJNA229468 839 182 1.406015 2.5589473 Calcarisporiella thermophila 911321 Fungi Fungi 113 7e-21   NTclustered gi|2837822849|ref|XM_069394498.1| 911321 g826 i0 81.119 3.56593406593407 143 25 78 2 14 155 492 633 Calcarisporiella thermophila 60S ribosomal protein uL30 (VTP21DRAFT_4121), partial mRNA blastn 649 113 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
24593514 24593514 PRJNA229468_S_NODE_600_length_209_cov_1.593750_g587_i0 PRJNA229468 600 209 1.59375 3.3309375 Henningerozyma blattae 1071379 Fungi Fungi 185 1.7299999999999994e-42   NTclustered gi|444319335|ref|XM_004180277.1| 1071380 g587 i0 83.173 34.4688995215311 208 29 98 6 1 205 247 43 Henningerozyma blattae CBS 6284 40S ribosomal protein uS11 (TBLA0D03060), partial mRNA blastn 7204 185 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Henningerozyma Henningerozyma blattae
25282658 25282658 PRJNA229468_S_NODE_820_length_184_cov_0.911111_g807_i0 PRJNA229468 820 184 0.911111 1.67644424 Eukaryota 2759 Fungi Fungi 324 3.01e-84   NTclustered gi|2264686569|gb|ON935460.1| 5127 g807 i0 98.37 100 184 3 100 0 1 184 214 31 Fusarium fujikuroi isolate X2dd small subunit ribosomal RNA gene, partial sequence blastn 18400 324 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium fujikuroi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;