contig_metadata
20 rows where analysis = "blastn", bioproject = "PRJNA229468" and tax_kingdom = "Bacillati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1056633 | 1056633 | PRJNA229468_S_NODE_961_length_173_cov_1.233871_g948_i0 | PRJNA229468 | 961 | 173 | 1.233871 | 2.13459683 | Rothia | 32207 | Bacteria | Bacteria | 320 | 3.61e-83 | NTclustered | gi|1247210625|gb|CP023510.1| | 43675 | g948 | i0 | 100 | 291.132947976879 | 173 | 0 | 100 | 0 | 1 | 173 | 652615 | 652443 | Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome | blastn | 50366 | 320 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia mucilaginosa | ||
| 4884545 | 4884545 | PRJNA229468_S_NODE_644_length_203_cov_0.948052_g631_i0 | PRJNA229468 | 644 | 203 | 0.948052 | 1.92454556 | Micrococcales | 85006 | Bacteria | Bacteria | 326 | 9.44e-85 | NTclustered | gi|1247210625|gb|CP023510.1| | 43675 | g631 | i0 | 95.567 | 360.162561576355 | 203 | 9 | 100 | 0 | 1 | 203 | 652910 | 653112 | Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome | blastn | 73113 | 326 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia mucilaginosa | ||
| 8020686 | 8020686 | PRJNA229468_S_NODE_1007_length_170_cov_1.264463_g994_i0 | PRJNA229468 | 1007 | 170 | 1.264463 | 2.1495871 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 300 | 4.6e-77 | NTclustered | gi|1723592958|emb|LR584267.1| | 1528099 | g994 | i0 | 98.256 | 276.317647058824 | 172 | 1 | 100 | 1 | 1 | 170 | 552297 | 552468 | Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1 | blastn | 46974 | 300 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 8020687 | 8020687 | PRJNA229468_S_NODE_287_length_292_cov_1.263374_g274_i0 | PRJNA229468 | 287 | 292 | 1.263374 | 3.68905208 | Arthrobacter dokdonellae | 2211210 | Bacteria | Bacteria | 510 | 3.71e-140 | NTclustered | gi|1409665507|gb|CP029642.1| | 2211210 | g274 | i0 | 98.282 | 458.366438356164 | 291 | 5 | 99 | 0 | 2 | 292 | 551070 | 550780 | Arthrobacter dokdonellae, complete genome | blastn | 133843 | 510 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Arthrobacter | Arthrobacter dokdonellae | ||
| 11259789 | 11259789 | PRJNA229468_S_NODE_1149_length_164_cov_1.208696_g1136_i0 | PRJNA229468 | 1149 | 164 | 1.208696 | 1.98226144 | Corynebacterium | 1716 | Bacteria | Bacteria | 272 | 9.65e-69 | NTclustered | gi|2212856580|gb|CP051667.1| | 37637 | g1136 | i0 | 96.933 | 323.018292682927 | 163 | 3 | 100 | 2 | 4 | 164 | 1103762 | 1103600 | Corynebacterium pseudodiphtheriticum strain 10700 chromosome | blastn | 52975 | 272 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium pseudodiphtheriticum | ||
| 11259790 | 11259790 | PRJNA229468_S_NODE_1169_length_163_cov_2.421053_g1156_i0 | PRJNA229468 | 1169 | 163 | 2.421053 | 3.94631639 | Paenibacillus | 44249 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|1240338366|gb|MF872593.1| | 58172 | g1156 | i0 | 100 | 226 | 163 | 0 | 100 | 0 | 1 | 163 | 1342 | 1180 | Paenibacillus sp. strain 16H1F15 16S ribosomal RNA gene, partial sequence | blastn | 36838 | 302 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus sp. | ||
| 11259793 | 11259793 | PRJNA229468_S_NODE_449_length_234_cov_1.578378_g436_i0 | PRJNA229468 | 449 | 234 | 1.578378 | 3.69340452 | Paenibacillus | 44249 | Bacteria | Bacteria | 431 | 2.3e-116 | NTclustered | gi|686561105|gb|CP009428.1| | 189426 | g436 | i0 | 100 | 965.32905982906 | 233 | 0 | 99 | 0 | 1 | 233 | 14719 | 14951 | Paenibacillus odorifer strain DSM 15391, complete genome | blastn | 225887 | 431 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus odorifer | ||
| 13809992 | 13809992 | PRJNA229468_S_NODE_1231_length_162_cov_0.902655_g1218_i0 | PRJNA229468 | 1231 | 162 | 0.902655 | 1.4623011 | Bacillales | 1385 | Bacteria | Bacteria | 294 | 2.03e-75 | NTclustered | gi|2264387772|gb|CP015553.1| | 1281 | g1218 | i0 | 99.383 | 486.006172839506 | 162 | 1 | 100 | 0 | 1 | 162 | 124482 | 124321 | Staphylococcus carnosus strain TMW 2.1596 chromosome, complete genome | blastn | 78733 | 294 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus carnosus | ||
| 13809994 | 13809994 | PRJNA229468_S_NODE_611_length_207_cov_0.955696_g598_i0 | PRJNA229468 | 611 | 207 | 0.955696 | 1.97829072 | Modestobacter | 88138 | Bacteria | Bacteria | 363 | 7.369999999999998e-96 | NTclustered | gi|470491309|ref|NR_077032.1| | 477641 | g598 | i0 | 99.01 | 379.289855072464 | 202 | 2 | 98 | 0 | 1 | 202 | 1018 | 817 | Modestobacter marinus strain BC501 23S ribosomal RNA, complete sequence | blastn | 78513 | 363 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Geodermatophilales | Geodermatophilaceae | Modestobacter | Modestobacter marinus | ||
| 15670093 | 15670093 | PRJNA229468_S_NODE_713_length_195_cov_1.527397_g700_i0 | PRJNA229468 | 713 | 195 | 1.527397 | 2.97842415 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 333 | 5.369999999999999e-87 | NTclustered | gi|2202949261|emb|OV972893.1| | 3107663 | g700 | i0 | 97.436 | 614.671794871795 | 195 | 5 | 100 | 0 | 1 | 195 | 5033557 | 5033751 | MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 | blastn | 119861 | 333 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 16944567 | 16944567 | PRJNA229468_S_NODE_174_length_361_cov_1.634615_g161_i0 | PRJNA229468 | 174 | 361 | 1.634615 | 5.90096015 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 592 | 1.6299999999999996e-164 | NTclustered | gi|2202949261|emb|OV972893.1| | 3107663 | g161 | i0 | 96.143 | 543.487534626039 | 363 | 12 | 100 | 2 | 1 | 361 | 5032293 | 5032655 | MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 | blastn | 196199 | 592 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 17634189 | 17634189 | PRJNA229468_S_NODE_834_length_182_cov_1.646617_g821_i0 | PRJNA229468 | 834 | 182 | 1.646617 | 2.99684294 | Arthrobacter | 1663 | Bacteria | Bacteria | 320 | 3.84e-83 | NTclustered | gi|2921126289|gb|CP102608.1| | 619291 | g821 | i0 | 98.352 | 428.796703296703 | 182 | 3 | 100 | 0 | 1 | 182 | 459346 | 459165 | Arthrobacter sp. N1 chromosome, complete genome | blastn | 78041 | 320 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Arthrobacter | Arthrobacter sp. N1 | ||
| 19493238 | 19493238 | PRJNA229468_S_NODE_1016_length_169_cov_2.775000_g1003_i0 | PRJNA229468 | 1016 | 169 | 2.775 | 4.68975 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 252 | 1.3e-62 | NTclustered | gi|2202949261|emb|OV972893.1| | 3107663 | g1003 | i0 | 93.529 | 700.585798816568 | 170 | 10 | 100 | 1 | 1 | 169 | 5031878 | 5032047 | MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 | blastn | 118399 | 252 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 21458301 | 21458301 | PRJNA229468_S_NODE_357_length_265_cov_2.222222_g344_i0 | PRJNA229468 | 357 | 265 | 2.222222 | 5.8888883 | Cutibacterium | 1912216 | Bacteria | Bacteria | 490 | 4.3299999999999986e-134 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g344 | i0 | 100 | 268.256603773585 | 265 | 0 | 100 | 0 | 1 | 265 | 56512 | 56248 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 71088 | 490 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 22043870 | 22043870 | PRJNA229468_S_NODE_598_length_209_cov_2.018750_g585_i0 | PRJNA229468 | 598 | 209 | 2.01875 | 4.2191875 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 287 | 4.61e-73 | NTclustered | gi|2202949261|emb|OV972893.1| | 3107663 | g585 | i0 | 91.429 | 405.832535885167 | 210 | 16 | 100 | 2 | 1 | 209 | 5033288 | 5033496 | MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 | blastn | 84819 | 287 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 22733344 | 22733344 | PRJNA229468_S_NODE_38_length_727_cov_4.001475_g32_i0 | PRJNA229468 | 38 | 727 | 4.001475 | 29.09072325 | Cutibacterium | 1912216 | Bacteria | Bacteria | 1343 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g32 | i0 | 100 | 282.95598349381 | 727 | 0 | 100 | 0 | 1 | 727 | 56164 | 55438 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 205709 | 1343 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 23319334 | 23319334 | PRJNA229468_S_NODE_1139_length_165_cov_0.775862_g1126_i0 | PRJNA229468 | 1139 | 165 | 0.775862 | 1.2801723 | Vulcanimicrobiota bacterium | 3107663 | Bacteria | Bacteria | 213 | 5.98e-51 | NTclustered | gi|2202949261|emb|OV972893.1| | 3107663 | g1126 | i0 | 91.139 | 386.018181818182 | 158 | 12 | 96 | 1 | 8 | 165 | 5032914 | 5033069 | MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 | blastn | 63693 | 213 | 1 | Bacteria | Bacillati | Vulcanimicrobiota | Vulcanimicrobiota bacterium | ||||||
| 24008524 | 24008524 | PRJNA229468_S_NODE_139_length_410_cov_1.637119_g126_i0 | PRJNA229468 | 139 | 410 | 1.637119 | 6.7121879 | Paenibacillus | 44249 | Bacteria | Bacteria | 747 | 0 | NTclustered | gi|686522490|gb|CP009281.1| | 1536770 | g126 | i0 | 99.512 | 1055.00731707317 | 410 | 2 | 100 | 0 | 1 | 410 | 15308 | 15717 | Paenibacillus sp. FSL R5-0345, complete genome | blastn | 432553 | 747 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus sp. FSL R5-0345 | ||
| 24008526 | 24008526 | PRJNA229468_S_NODE_739_length_191_cov_0.894366_g726_i0 | PRJNA229468 | 739 | 191 | 0.894366 | 1.70823906 | Streptococcus | 1301 | Bacteria | Bacteria | 353 | 4.02e-93 | NTclustered | gi|1782758915|gb|CP018189.1| | 1304 | g726 | i0 | 100 | 617.952879581152 | 191 | 0 | 100 | 0 | 1 | 191 | 17677 | 17487 | Streptococcus salivarius strain ICDC3 chromosome, complete genome | blastn | 118029 | 353 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus salivarius | ||
| 25282653 | 25282653 | PRJNA229468_S_NODE_20_length_915_cov_3.091224_g16_i0 | PRJNA229468 | 20 | 915 | 3.091224 | 28.2846996 | Cutibacterium | 1912216 | Bacteria | Bacteria | 1674 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g16 | i0 | 99.672 | 280.55737704918 | 915 | 3 | 100 | 0 | 1 | 915 | 56490 | 57404 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 256710 | 1674 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;