RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA222400" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA222400 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2331803 2331803 PRJNA222400_P_NODE_6362_length_178_cov_1.209302_g6329_i0 PRJNA222400 6362 178 1.209302 2.15255756 Asplanchna 84396 Rotifera other_Eukaryota 65.8 1.93e-6   NTclustered gi|2899343712|gb|PQ788833.1| 2005548 g6329 i0 90.196 0.573033707865168 51 3 28 2 10 59 1908 1859 Asplanchna brightwellii chromosome I mitochondrion, complete sequence blastn 102 65.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna brightwellii
4194249 4194249 PRJNA222400_P_NODE_1204_length_470_cov_2.211401_g1171_i0 PRJNA222400 1204 470 2.211401 10.3935847 Philodina citrina 468664 Rotifera other_Eukaryota 353 1.12e-92   NTclustered gi|407227484|emb|FR856884.1| 468664 g1171 i0 80.462 2.32978723404255 476 81 100 9 1 470 10610 11079 Philodina citrina complete mitochondrial genome blastn 1095 353 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
6744873 6744873 PRJNA222400_P_NODE_6466_length_176_cov_1.637795_g6433_i0 PRJNA222400 6466 176 1.637795 2.8825192 Rotaria rotatoria 231624 Rotifera other_Eukaryota 145 2.38e-30   NTclustered gi|270267490|ref|NC_013568.1| 231624 g6433 i0 82.424 1.21022727272727 165 29 94 0 8 172 10016 10180 Rotaria rotatoria mitochondrion, complete genome blastn 213 145 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
9295305 9295305 PRJNA222400_P_NODE_6508_length_176_cov_1.228346_g6475_i0 PRJNA222400 6508 176 1.228346 2.16188896 Habrotrocha constricta 104786 Rotifera other_Eukaryota 243 8.21e-60   NTclustered gi|402761805|gb|JX184034.1| 104786 g6475 i0 91.477 2 176 15 100 0 1 176 518 693 Habrotrocha constricta NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial blastn 352 243 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
11845823 11845823 PRJNA222400_P_NODE_8150_length_166_cov_0.888889_g8117_i0 PRJNA222400 8150 166 0.888889 1.47555574 Brachionus rubens 392764 Rotifera other_Eukaryota 167 4.76e-37   NTclustered gi|1802791198|gb|MN256531.1| 392764 g8117 i0 87.943 0.849397590361446 141 17 85 0 1 141 10368 10508 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 141 167 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
14396283 14396283 PRJNA222400_P_NODE_632_length_651_cov_3.740864_g602_i0 PRJNA222400 632 651 3.740864 24.35302464 Brachionus rubens 392764 Rotifera other_Eukaryota 370 1.57e-97   NTclustered gi|1802791198|gb|MN256531.1| 392764 g602 i0 78.583 26.4715821812596 593 104 89 20 1 582 11819 11239 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 17233 370 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
16944480 16944480 PRJNA222400_P_NODE_3774_length_231_cov_1.115385_g3741_i0 PRJNA222400 3774 231 1.115385 2.57653935 Habrotrocha constricta 104786 Rotifera other_Eukaryota 224 4.129999999999999e-54   NTclustered gi|402761757|gb|JX184010.1| 104786 g3741 i0 84.513 1.95670995670996 226 35 98 0 1 226 247 22 Habrotrocha constricta cytochrome c oxidase subunit 2 (COX2) gene, complete cds; mitochondrial blastn 452 224 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
19493110 19493110 PRJNA222400_P_NODE_1056_length_501_cov_3.022124_g1023_i0 PRJNA222400 1056 501 3.022124 15.14084124 Philodina citrina 468664 Rotifera other_Eukaryota 593 6.489999999999998e-165   NTclustered gi|407227484|emb|FR856884.1| 468664 g1023 i0 88.048 1.93213572854291 502 58 100 2 1 501 3341 3841 Philodina citrina complete mitochondrial genome blastn 968 593 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
22043798 22043798 PRJNA222400_P_NODE_498_length_723_cov_8.382789_g469_i0 PRJNA222400 498 723 8.382789 60.60756447 Philodina citrina 468664 Rotifera other_Eukaryota 839 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g469 i0 87.808 17.0774550484094 730 72 100 16 1 723 2394 1675 Philodina citrina complete mitochondrial genome blastn 12347 839 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;