RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA222400" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA222400 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4194329 4194329 PRJNA222400_P_NODE_6844_length_172_cov_1.268293_g6811_i0 PRJNA222400 6844 172 1.268293 2.18146396 Halisarca sp. P10x32 1346640 Porifera other_Eukaryota 119 1.4000000000000002e-22   NTclustered gi|512765213|gb|KC869451.1| 1346640 g6811 i0 86.364 67.4069767441861 110 13 63 2 41 149 2935 2827 Halisarca sp. P10x32 28S ribosomal RNA gene, partial sequence blastn 11594 119 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Chondrillida Halisarcidae Halisarca Halisarca sp. P10x32
13121036 13121036 PRJNA222400_P_NODE_7471_length_168_cov_0.873950_g7438_i0 PRJNA222400 7471 168 0.87395 1.468236 Sycon ciliatum 27933 Porifera other_Eukaryota 73.1 1.08e-8   NTclustered gi|2732897318|ref|XM_065320030.1| 27933 g7438 i0 97.619 0.25 42 1 25 0 22 63 3016 2975 PREDICTED: Sycon ciliatum RNA helicase aquarius-like (LOC135805909), mRNA blastn 42 73.1 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;