contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA222400" and tax_phylum = "Evosea"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1641982 | 1641982 | PRJNA222400_P_NODE_3042_length_270_cov_2.004525_g3009_i0 | PRJNA222400 | 3042 | 270 | 2.004525 | 5.4122175 | Entamoeba invadens | 33085 | Evosea | other_Eukaryota | 126 | 1.44e-24 | NTclustered | gi|511093284|dbj|AK424015.1| | 33085 | g3009 | i0 | 83.212 | 9.11481481481482 | 137 | 23 | 51 | 0 | 44 | 180 | 1146 | 1282 | Entamoeba invadens cDNA clone: Xei-012P21, elongation factor 1-alpha, putative, complete cds, strain: IP1 | blastn | 2461 | 126 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Entamoeba | Entamoeba invadens | |||
| 1641991 | 1641991 | PRJNA222400_P_NODE_4262_length_216_cov_0.904192_g4229_i0 | PRJNA222400 | 4262 | 216 | 0.904192 | 1.95305472 | Heterostelium album | 2086695 | Evosea | other_Eukaryota | 237 | 4.8999999999999996e-58 | NTclustered | gi|1160573488|ref|XM_020576922.1| | 670386 | g4229 | i0 | 86.854 | 3.88425925925926 | 213 | 26 | 98 | 2 | 5 | 216 | 1 | 212 | Polysphondylium pallidum PN500 Ras GTPase (rasG), partial mRNA | blastn | 839 | 237 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Acytosteliaceae | Heterostelium | Heterostelium album | ||
| 1642020 | 1642020 | PRJNA222400_P_NODE_7282_length_169_cov_0.866667_g7249_i0 | PRJNA222400 | 7282 | 169 | 0.866667 | 1.46466723 | Cavenderia fasciculata | 261658 | Evosea | other_Eukaryota | 104 | 3.84e-18 | NTclustered | gi|470239368|ref|XM_004351398.1| | 261658 | g7249 | i0 | 88.372 | 3.26627218934911 | 86 | 10 | 51 | 0 | 73 | 158 | 311 | 226 | Cavenderia fasciculata 60S ribosomal protein L9 (rpl9), partial mRNA | blastn | 552 | 104 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Cavenderiaceae | Cavenderia | Cavenderia fasciculata | ||
| 4194253 | 4194253 | PRJNA222400_P_NODE_1524_length_415_cov_2.573770_g1491_i0 | PRJNA222400 | 1524 | 415 | 2.57377 | 10.6811455 | Entamoeba nuttalli | 412467 | Evosea | other_Eukaryota | 195 | 6.269999999999999e-45 | NTclustered | gi|672810997|ref|XM_008862315.1| | 1076696 | g1491 | i0 | 81.897 | 4.83614457831325 | 232 | 40 | 56 | 2 | 41 | 271 | 38 | 268 | Entamoeba nuttalli P19 ribosomal S17 protein partial mRNA | blastn | 2007 | 195 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Entamoeba | Entamoeba nuttalli | |||
| 5470601 | 5470601 | PRJNA222400_P_NODE_9185_length_162_cov_1.778761_g9152_i0 | PRJNA222400 | 9185 | 162 | 1.778761 | 2.88159282 | Entamoeba dispar | 46681 | Evosea | other_Eukaryota | 198 | 1.64e-46 | NTclustered | gi|167381527|ref|XM_001735709.1| | 370354 | g9152 | i0 | 89.241 | 95.7345679012346 | 158 | 17 | 98 | 0 | 5 | 162 | 449 | 292 | Entamoeba dispar SAW760 actin (EDI_325560), partial mRNA | blastn | 15509 | 198 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Entamoeba | Entamoeba dispar | |||
| 6744810 | 6744810 | PRJNA222400_P_NODE_2026_length_353_cov_2.049342_g1993_i0 | PRJNA222400 | 2026 | 353 | 2.049342 | 7.23417726 | Acytostelium subglobosum | 361139 | Evosea | other_Eukaryota | 193 | 1.88e-44 | NTclustered | gi|831757457|ref|XM_012893582.1| | 1410327 | g1993 | i0 | 84.817 | 15.628895184136 | 191 | 29 | 54 | 0 | 17 | 207 | 671 | 861 | Acytostelium subglobosum LB1 hypothetical protein partial mRNA | blastn | 5517 | 193 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Acytosteliaceae | Acytostelium | Acytostelium subglobosum | ||
| 11259738 | 11259738 | PRJNA222400_P_NODE_629_length_652_cov_4.540630_g599_i0 | PRJNA222400 | 629 | 652 | 4.54063 | 29.6049076 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 392 | 3.36e-104 | NTclustered | gi|330805712|ref|XM_003290775.1| | 5786 | g599 | i0 | 86.895 | 146.177914110429 | 351 | 44 | 56 | 2 | 1 | 350 | 183 | 532 | Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_92560), mRNA | blastn | 95308 | 392 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium purpureum | ||
| 14396239 | 14396239 | PRJNA222400_P_NODE_2632_length_297_cov_2.310484_g2599_i0 | PRJNA222400 | 2632 | 297 | 2.310484 | 6.86213748 | Physarum polycephalum | 5791 | Evosea | other_Eukaryota | 252 | 2.53e-62 | NTclustered | gi|156151273|dbj|AB300196.1| | 5791 | g2599 | i0 | 83.456 | 90.6936026936027 | 272 | 43 | 91 | 2 | 24 | 294 | 1478 | 1208 | Physarum polycephalum hsp90 mRNA for heat shock protein 90, partial cds | blastn | 26936 | 252 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Physariida | Physaraceae | Physarum | Physarum polycephalum | ||
| 16944469 | 16944469 | PRJNA222400_P_NODE_2894_length_278_cov_3.567686_g2861_i0 | PRJNA222400 | 2894 | 278 | 3.567686 | 9.91816708 | Acytostelium subglobosum | 361139 | Evosea | other_Eukaryota | 315 | 2.96e-81 | NTclustered | gi|831753561|ref|XM_012892397.1| | 1410327 | g2861 | i0 | 89.879 | 81.9064748201439 | 247 | 22 | 88 | 2 | 1 | 244 | 252 | 6 | Acytostelium subglobosum LB1 hypothetical protein partial mRNA | blastn | 22770 | 315 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Acytosteliaceae | Acytostelium | Acytostelium subglobosum | ||
| 23319268 | 23319268 | PRJNA222400_P_NODE_4499_length_209_cov_1.762500_g4466_i0 | PRJNA222400 | 4499 | 209 | 1.7625 | 3.683625 | Dictyostelium discoideum | 44689 | Evosea | other_Eukaryota | 158 | 3.77e-34 | NTclustered | gi|66817211|ref|XM_637392.1| | 352472 | g4466 | i0 | 89.062 | 17.822966507177 | 128 | 13 | 61 | 1 | 56 | 182 | 184 | 311 | Dictyostelium discoideum AX4 60S ribosomal protein L4 (rpl4) mRNA, complete cds | blastn | 3725 | 158 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium discoideum | ||
| 23319269 | 23319269 | PRJNA222400_P_NODE_459_length_748_cov_1.716738_g432_i0 | PRJNA222400 | 459 | 748 | 1.716738 | 12.84120024 | Acytostelium subglobosum | 361139 | Evosea | other_Eukaryota | 457 | 1.36e-123 | NTclustered | gi|831769224|ref|XM_012897186.1| | 1410327 | g432 | i0 | 79.167 | 78.171122994652407 | 672 | 131 | 89 | 7 | 13 | 678 | 687 | 19 | Acytostelium subglobosum LB1 hypothetical protein partial mRNA | blastn | 58472 | 457 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Acytosteliaceae | Acytostelium | Acytostelium subglobosum |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;