RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA222400" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA222400 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1641978 1641978 PRJNA222400_P_NODE_2642_length_297_cov_1.258065_g2609_i0 PRJNA222400 2642 297 1.258065 3.73645305 Proleptomonas faecicola 149084 SAR_Eukaryotes SAR_Eukaryotes 294 4.15e-75   NTclustered gi|302026150|gb|GQ377654.1| 149084 g2609 i0 85.663 94.4646464646465 279 40 94 0 18 296 910 1188 Proleptomonas faecicola beta-tubulin (Btub) gene, partial cds blastn 28056 294 1 Eukaryota Sar   Cercozoa   Glissomonadida   Proleptomonas Proleptomonas faecicola
8020580 8020580 PRJNA222400_P_NODE_2107_length_344_cov_2.491525_g2074_i0 PRJNA222400 2107 344 2.491525 8.570846 Proleptomonas faecicola 149084 SAR_Eukaryotes SAR_Eukaryotes 243 1.8e-59   NTclustered gi|300676734|gb|GQ377664.1| 149084 g2074 i0 80.564 47.9796511627907 319 58 92 4 1 317 56 372 Proleptomonas faecicola alpha-tubulin (Atub) gene, partial cds blastn 16505 243 1 Eukaryota Sar   Cercozoa   Glissomonadida   Proleptomonas Proleptomonas faecicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;