contig_metadata
26 rows where analysis = "blastn", bioproject = "PRJNA217180" and tax_kingdom = "Bacillati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1641876 | 1641876 | PRJNA217180_P_NODE_14882_length_162_cov_0.902655_g14782_i0 | PRJNA217180 | 14882 | 162 | 0.902655 | 1.4623011 | Aurantimicrobium photophilum | 1987356 | Bacteria | Bacteria | 171 | 3.57e-38 | NTclustered | gi|1395829960|gb|CP023994.1| | 1987356 | g14782 | i0 | 89.13 | 0.851851851851852 | 138 | 14 | 85 | 1 | 5 | 142 | 1364261 | 1364397 | Aurantimicrobium photophilum strain MWH-Mo1 chromosome, complete genome | blastn | 138 | 171 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Aurantimicrobium | Aurantimicrobium photophilum | ||
| 2331330 | 2331330 | PRJNA217180_P_NODE_2842_length_338_cov_1.688581_g2742_i0 | PRJNA217180 | 2842 | 338 | 1.688581 | 5.70740378 | Cutibacterium | 1912216 | Bacteria | Bacteria | 625 | 1.4999999999999999e-174 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g2742 | i0 | 100 | 248.822485207101 | 338 | 0 | 100 | 0 | 1 | 338 | 55368 | 55705 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 84102 | 625 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 3606535 | 3606535 | PRJNA217180_P_NODE_5863_length_241_cov_2.463542_g5763_i0 | PRJNA217180 | 5863 | 241 | 2.463542 | 5.93713622 | Brevibacterium | 1696 | Bacteria | Bacteria | 435 | 1.84e-117 | NTclustered | gi|1948580264|gb|CP065989.1| | 33889 | g5763 | i0 | 99.174 | 358.717842323651 | 242 | 1 | 100 | 1 | 1 | 241 | 1415520 | 1415279 | Brevibacterium casei strain FDAARGOS_990 chromosome, complete genome | blastn | 86451 | 435 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Brevibacteriaceae | Brevibacterium | Brevibacterium casei | ||
| 4194181 | 4194181 | PRJNA217180_P_NODE_14364_length_163_cov_0.894737_g14264_i0 | PRJNA217180 | 14364 | 163 | 0.894737 | 1.45842131 | Streptococcus cristatus | 45634 | Bacteria | Bacteria | 291 | 2.64e-74 | NTclustered | gi|1823511124|gb|CP050133.1| | 889201 | g14264 | i0 | 98.773 | 96.4662576687117 | 163 | 2 | 100 | 0 | 1 | 163 | 2020424 | 2020586 | Streptococcus cristatus ATCC 51100 chromosome, complete genome | blastn | 15724 | 291 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus cristatus | ||
| 6158767 | 6158767 | PRJNA217180_P_NODE_4345_length_275_cov_0.902655_g4245_i0 | PRJNA217180 | 4345 | 275 | 0.902655 | 2.48230125 | Cutibacterium | 1912216 | Bacteria | Bacteria | 508 | 1.2499999999999999e-139 | NTclustered | gi|2493043383|gb|CP114012.1| | 1747 | g4245 | i0 | 100 | 50.9854545454545 | 275 | 0 | 100 | 0 | 1 | 275 | 1581626 | 1581900 | Cutibacterium acnes strain CBS-BPNBT19269 chromosome, complete genome | blastn | 14021 | 508 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 6158775 | 6158775 | PRJNA217180_P_NODE_9765_length_188_cov_1.467626_g9665_i0 | PRJNA217180 | 9765 | 188 | 1.467626 | 2.75913688 | Cutibacterium | 1912216 | Bacteria | Bacteria | 348 | 1.84e-91 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g9665 | i0 | 100 | 94.5265957446808 | 188 | 0 | 100 | 0 | 1 | 188 | 2087701 | 2087888 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 17771 | 348 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 6744709 | 6744709 | PRJNA217180_P_NODE_10706_length_181_cov_1.545455_g10606_i0 | PRJNA217180 | 10706 | 181 | 1.545455 | 2.79727355 | Amycolatopsis sp. EV170708-02-1 | 2919322 | Bacteria | Bacteria | 84.2 | 5.45e-12 | NTclustered | gi|2203495119|gb|CP092497.1| | 2919322 | g10606 | i0 | 87.5 | 1.15469613259669 | 72 | 9 | 40 | 0 | 44 | 115 | 5076822 | 5076751 | Amycolatopsis sp. EV170708-02-1 chromosome | blastn | 209 | 84.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Amycolatopsis | Amycolatopsis sp. EV170708-02-1 | ||
| 8020494 | 8020494 | PRJNA217180_P_NODE_13347_length_165_cov_0.879310_g13247_i0 | PRJNA217180 | 13347 | 165 | 0.87931 | 1.4508615 | Micrococcus antarcticus | 86171 | Bacteria | Bacteria | 255 | 9.8e-64 | NTclustered | gi|2851356301|gb|CP085253.1| | 86171 | g13247 | i0 | 94.545 | 2 | 165 | 9 | 100 | 0 | 1 | 165 | 162194 | 162030 | Micrococcus antarcticus strain ABH-515 chromosome, complete genome | blastn | 330 | 255 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus antarcticus | ||
| 8020514 | 8020514 | PRJNA217180_P_NODE_4787_length_264_cov_0.948837_g4687_i0 | PRJNA217180 | 4787 | 264 | 0.948837 | 2.50492968 | Brevibacterium epidermidis | 1698 | Bacteria | Bacteria | 488 | 1.5499999999999999e-133 | NTclustered | gi|39466|emb|X13555.1| | 1698 | g4687 | i0 | 100 | 1 | 264 | 0 | 100 | 0 | 1 | 264 | 543 | 806 | Brevibacterium epidermidis BepI modification methylase gene | blastn | 264 | 488 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Brevibacteriaceae | Brevibacterium | Brevibacterium epidermidis | ||
| 8708744 | 8708744 | PRJNA217180_P_NODE_8347_length_204_cov_1.548387_g8247_i0 | PRJNA217180 | 8347 | 204 | 1.548387 | 3.15870948 | Geobacillus | 129337 | Bacteria | Bacteria | 377 | 2.59e-100 | NTclustered | gi|2529062746|gb|CP128458.1| | 1422 | g8247 | i0 | 100 | 918.470588235294 | 204 | 0 | 100 | 0 | 1 | 204 | 14224 | 14427 | Geobacillus stearothermophilus strain EF60133 chromosome, complete genome | blastn | 187368 | 377 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Geobacillus | Geobacillus stearothermophilus | ||
| 10571208 | 10571208 | PRJNA217180_P_NODE_9929_length_187_cov_1.442029_g9829_i0 | PRJNA217180 | 9929 | 187 | 1.442029 | 2.69659423 | Pseudarthrobacter oxydans | 1671 | Bacteria | Bacteria | 302 | 1.44e-77 | NTclustered | gi|2666964057|dbj|AP029193.1| | 1671 | g9829 | i0 | 95.722 | 86.0534759358289 | 187 | 8 | 100 | 0 | 1 | 187 | 3229802 | 3229988 | Pseudarthrobacter oxydans JCM 2521 DNA, complete genome | blastn | 16092 | 302 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Pseudarthrobacter | Pseudarthrobacter oxydans | ||
| 11259267 | 11259267 | PRJNA217180_P_NODE_9829_length_188_cov_1.129496_g9729_i0 | PRJNA217180 | 9829 | 188 | 1.129496 | 2.12345248 | Cutibacterium | 1912216 | Bacteria | Bacteria | 342 | 8.539999999999999e-90 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g9729 | i0 | 99.468 | 51 | 188 | 1 | 100 | 0 | 1 | 188 | 992157 | 991970 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 9588 | 342 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 11845673 | 11845673 | PRJNA217180_P_NODE_15470_length_161_cov_0.910714_g15370_i0 | PRJNA217180 | 15470 | 161 | 0.910714 | 1.46624954 | Janibacter sp. CX7 | 2963431 | Bacteria | Bacteria | 276 | 7.29e-70 | NTclustered | gi|2274439729|gb|CP101464.1| | 2963431 | g15370 | i0 | 97.516 | 9.46583850931677 | 161 | 4 | 100 | 0 | 1 | 161 | 2138097 | 2138257 | Janibacter sp. CX7 chromosome, complete genome | blastn | 1524 | 276 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Intrasporangiaceae | Janibacter | Janibacter sp. CX7 | ||
| 12534646 | 12534646 | PRJNA217180_P_NODE_11230_length_176_cov_1.606299_g11130_i0 | PRJNA217180 | 11230 | 176 | 1.606299 | 2.82708624 | Cutibacterium | 1912216 | Bacteria | Bacteria | 326 | 7.92e-85 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g11130 | i0 | 100 | 61.9886363636364 | 176 | 0 | 100 | 0 | 1 | 176 | 2094194 | 2094019 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 10910 | 326 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 14396141 | 14396141 | PRJNA217180_P_NODE_13332_length_165_cov_0.879310_g13232_i0 | PRJNA217180 | 13332 | 165 | 0.87931 | 1.4508615 | Candidatus Avichristensenella intestinipullorum | 2840693 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|2729058690|emb|OZ006990.1| | 2840693 | g13232 | i0 | 94.444 | 0.218181818181818 | 36 | 1 | 22 | 1 | 92 | 127 | 2040746 | 2040712 | MAG: Candidatus Avichristensenella intestinipullorum isolate metabat2_pooled_hifiasm.151 MAG genome assembly, chromosome: 1 | blastn | 36 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Candidatus Avichristensenella | Candidatus Avichristensenella intestinipullorum | ||||
| 15083613 | 15083613 | PRJNA217180_P_NODE_15892_length_153_cov_2.192308_g15792_i0 | PRJNA217180 | 15892 | 153 | 2.192308 | 3.35423124 | Cutibacterium | 1912216 | Bacteria | Bacteria | 171 | 3.32e-38 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g15792 | i0 | 100 | 50.6666666666667 | 92 | 0 | 99 | 0 | 1 | 92 | 1280630 | 1280721 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 7752 | 171 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 17633653 | 17633653 | PRJNA217180_P_NODE_2394_length_372_cov_0.857585_g2294_i0 | PRJNA217180 | 2394 | 372 | 0.857585 | 3.1902162 | Corynebacterium | 1716 | Bacteria | Bacteria | 604 | 2.17e-168 | NTclustered | gi|2550471320|gb|CP100376.1| | 38284 | g2294 | i0 | 96.467 | 374.922043010753 | 368 | 9 | 98 | 3 | 1 | 366 | 2342295 | 2342660 | Corynebacterium accolens strain CA7 chromosome | blastn | 139471 | 610 | 0.99016393442623 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium accolens | ||
| 18907502 | 18907502 | PRJNA217180_P_NODE_13475_length_165_cov_0.879310_g13375_i0 | PRJNA217180 | 13475 | 165 | 0.87931 | 1.4508615 | Streptococcus | 1301 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|1782758915|gb|CP018189.1| | 1304 | g13375 | i0 | 100 | 563.163636363636 | 165 | 0 | 100 | 0 | 1 | 165 | 17959 | 18123 | Streptococcus salivarius strain ICDC3 chromosome, complete genome | blastn | 92922 | 305 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus salivarius | ||
| 20768656 | 20768656 | PRJNA217180_P_NODE_9757_length_188_cov_1.467626_g9657_i0 | PRJNA217180 | 9757 | 188 | 1.467626 | 2.75913688 | Corynebacterium sp. LaCa117 | 3391424 | Bacteria | Bacteria | 348 | 1.84e-91 | NTclustered | gi|2888572763|gb|CP177102.1| | 3391424 | g9657 | i0 | 100 | 36.313829787234 | 188 | 0 | 100 | 0 | 1 | 188 | 1137552 | 1137739 | Corynebacterium sp. LaCa117 chromosome, complete genome | blastn | 6827 | 348 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sp. LaCa117 | ||
| 21457787 | 21457787 | PRJNA217180_P_NODE_14857_length_162_cov_0.902655_g14757_i0 | PRJNA217180 | 14857 | 162 | 0.902655 | 1.4623011 | Cutibacterium | 1912216 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g14757 | i0 | 100 | 51 | 162 | 0 | 100 | 0 | 1 | 162 | 1919862 | 1920023 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 8262 | 300 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 22043657 | 22043657 | PRJNA217180_P_NODE_13058_length_166_cov_0.871795_g12958_i0 | PRJNA217180 | 13058 | 166 | 0.871795 | 1.4471797 | Candidatus Planktophila sulfonica | 1884904 | Bacteria | Bacteria | 235 | 1.2899999999999998e-57 | NTclustered | gi|1240552849|gb|CP016773.1| | 1884904 | g12958 | i0 | 92.216 | 5.01807228915663 | 167 | 11 | 100 | 2 | 1 | 166 | 1320637 | 1320802 | Candidatus Planktophila sulfonica, complete genome | blastn | 833 | 235 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Candidatus Nanopelagicales | Candidatus Nanopelagicaceae | Candidatus Planktophila | Candidatus Planktophila sulfonica | ||
| 22732812 | 22732812 | PRJNA217180_P_NODE_10318_length_184_cov_1.466667_g10218_i0 | PRJNA217180 | 10318 | 184 | 1.466667 | 2.69866728 | Cutibacterium | 1912216 | Bacteria | Bacteria | 340 | 2.99e-89 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g10218 | i0 | 100 | 62.820652173913 | 184 | 0 | 100 | 0 | 1 | 184 | 2233440 | 2233257 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 11559 | 340 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 23319144 | 23319144 | PRJNA217180_P_NODE_10079_length_186_cov_1.138686_g9979_i0 | PRJNA217180 | 10079 | 186 | 1.138686 | 2.11795596 | Staphylococcus cohnii | 29382 | Bacteria | Bacteria | 344 | 2.34e-90 | NTclustered | gi|1373834432|emb|LT963440.1| | 29382 | g9979 | i0 | 100 | 54.2311827956989 | 186 | 0 | 100 | 0 | 1 | 186 | 1302308 | 1302493 | Staphylococcus cohnii isolate Staphylococcus cohnii ATCC 29974 genome assembly, chromosome: I | blastn | 10087 | 344 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus cohnii | ||
| 24008001 | 24008001 | PRJNA217180_P_NODE_4159_length_280_cov_4.588745_g4059_i0 | PRJNA217180 | 4159 | 280 | 4.588745 | 12.848486 | Cutibacterium | 1912216 | Bacteria | Bacteria | 512 | 9.85e-141 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g4059 | i0 | 99.643 | 268.228571428571 | 280 | 1 | 100 | 0 | 1 | 280 | 56469 | 56190 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 75104 | 512 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 24008005 | 24008005 | PRJNA217180_P_NODE_6739_length_227_cov_1.432584_g6639_i0 | PRJNA217180 | 6739 | 227 | 1.432584 | 3.25196568 | Micrococcus | 1269 | Bacteria | Bacteria | 409 | 1.04e-109 | NTclustered | gi|2873038046|gb|CP176570.1| | 1270 | g6639 | i0 | 99.119 | 355.004405286344 | 227 | 2 | 100 | 0 | 1 | 227 | 1554637 | 1554863 | Micrococcus luteus strain SZ.RS01 chromosome, complete genome | blastn | 80586 | 409 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 25282122 | 25282122 | PRJNA217180_P_NODE_15540_length_161_cov_0.910714_g15440_i0 | PRJNA217180 | 15540 | 161 | 0.910714 | 1.46624954 | root | 1 | Root_unresolved | Root_unresolved | 298 | 1.56e-76 | NTclustered | gi|1966870119|gb|CP068484.1| | 1274 | g15440 | i0 | 100 | 5.95652173913043 | 161 | 0 | 100 | 0 | 1 | 161 | 355148 | 355308 | Dermacoccus nishinomiyaensis strain FDAARGOS_1119 chromosome | blastn | 959 | 298 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Dermacoccaceae | Dermacoccus | Dermacoccus nishinomiyaensis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;