RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA207719" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA207719 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4884000 4884000 PRJNA207719_P_NODE_584_length_265_cov_3.220339_g564_i0 PRJNA207719 584 265 3.220339 8.53389835 Malassezia 55193 Fungi Fungi 442 1.2299999999999995e-119   NTclustered gi|1101565660|gb|KX839636.1| 55194 g564 i0 96.226 99.977358490566 265 6 100 1 1 265 565 305 Malassezia furfur isolate GDMUZJ2015102 26S ribosomal RNA gene, partial sequence blastn 26494 442 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia furfur
16944351 16944351 PRJNA207719_P_NODE_514_length_286_cov_3.120623_g494_i0 PRJNA207719 514 286 3.120623 8.92498178 Malassezia restricta 76775 Fungi Fungi 331 3.0300000000000002e-86   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g494 i0 97.917 68.0594405594406 192 3 67 1 1 192 3019 3209 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 19465 331 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;