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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA207343" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA207343 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1641804 1641804 PRJNA207343_S_NODE_8362_length_194_cov_3.292994_g7825_i0 PRJNA207343 8362 194 3.292994 6.38840836 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 359 8.809999999999999e-95   NTclustered gi|238617602|gb|FJ973377.1| 188950 g7825 i0 100 27.9948453608247 194 0 100 0 1 194 2911 2718 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 5431 359 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
2917621 2917621 PRJNA207343_S_NODE_7563_length_212_cov_3.040000_g7026_i0 PRJNA207343 7563 212 3.04 6.4448 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 255 1.32e-63   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g7026 i0 90.722 72.5377358490566 194 15 91 3 1 193 3682 3873 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 15378 255 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
2917650 2917650 PRJNA207343_S_NODE_8663_length_189_cov_1.243421_g8126_i0 PRJNA207343 8663 189 1.243421 2.35006569 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 344 2.39e-90   NTclustered gi|238617602|gb|FJ973377.1| 188950 g8126 i0 99.471 1 189 1 100 0 1 189 477 665 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 189 344 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
8020169 8020169 PRJNA207343_S_NODE_10587_length_160_cov_16.691057_g10050_i0 PRJNA207343 10587 160 16.691057 26.7056912 Cercozoa sp. CC-2009d 629762 SAR_Eukaryotes SAR_Eukaryotes 139 9.9e-29   NTclustered gi|290760487|gb|GQ144690.1| 629762 g10050 i0 82.609 70.41875 161 24 100 4 1 160 1471 1628 Cercozoa sp. CC-2009d large subunit ribosomal RNA gene, partial sequence blastn 11267 139 1 Eukaryota Sar   Cercozoa         Cercozoa sp. CC-2009d
10571013 10571013 PRJNA207343_S_NODE_6289_length_251_cov_3.897196_g5752_i0 PRJNA207343 6289 251 3.897196 9.78196196 Rosculus vulgaris 2231165 SAR_Eukaryotes SAR_Eukaryotes 267 7.459999999999999e-67   NTclustered gi|1402550474|gb|MH488760.1| 2231165 g5752 i0 86.747 8.32270916334661 249 22 98 5 7 251 2566 2807 Rosculus vulgaris isolate CCA sequence blastn 2089 267 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus vulgaris
11845487 11845487 PRJNA207343_S_NODE_5190_length_302_cov_4.532075_g4653_i0 PRJNA207343 5190 302 4.532075 13.6868665 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 466 8.47e-127   NTclustered gi|1402550476|gb|MH488762.1| 2231160 g4653 i0 95.254 56.9403973509934 295 12 97 2 9 302 1965 1672 Rosculus sp. isolate CCAC3 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 17196 466 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
13120845 13120845 PRJNA207343_S_NODE_8791_length_186_cov_7.919463_g8254_i0 PRJNA207343 8791 186 7.919463 14.73020118 Metromonas simplex 281027 SAR_Eukaryotes SAR_Eukaryotes 250 5.25e-62   NTclustered gi|197723534|gb|EF681916.2| 281027 g8254 i0 90.909 100.596774193548 187 16 100 1 1 186 1228 1042 Metromonas simplex strain HFCC68 28S ribosomal RNA gene, partial sequence blastn 18711 250 1 Eukaryota Sar   Cercozoa Imbricatea   Metromonadea Metromonas Metromonas simplex
16358414 16358414 PRJNA207343_S_NODE_8213_length_197_cov_6.950000_g7676_i0 PRJNA207343 8213 197 6.95 13.6915 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 263 7.239999999999999e-66   NTclustered gi|88792583|gb|DQ386164.1| 372086 g7676 i0 94.22 87.8071065989848 173 9 87 1 18 189 1397 1225 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 17298 263 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
19492966 19492966 PRJNA207343_S_NODE_8076_length_200_cov_8.098160_g7539_i0 PRJNA207343 8076 200 8.09816 16.19632 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 165 2.14e-36   NTclustered gi|238617602|gb|FJ973377.1| 188950 g7539 i0 82.564 19.145 195 27 96 7 7 197 2905 2714 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 3829 165 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
22043353 22043353 PRJNA207343_S_NODE_10498_length_161_cov_8.669355_g9961_i0 PRJNA207343 10498 161 8.669355 13.95766155 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 206 9.7e-49   NTclustered gi|88792583|gb|DQ386164.1| 372086 g9961 i0 90.385 103.968944099379 156 15 97 0 6 161 1378 1533 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 16739 206 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
22043458 22043458 PRJNA207343_S_NODE_3858_length_398_cov_146.542936_g3321_i0 PRJNA207343 3858 398 146.542936 583.24088528 Rosculus incognitus 2231162 SAR_Eukaryotes SAR_Eukaryotes 416 1.17e-111   NTclustered gi|1402550483|gb|MH488769.1| 2231162 g3321 i0 91.973 46.1633165829146 299 20 75 4 101 398 1985 1690 Rosculus incognitus isolate ATCC 50577 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 18373 416 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus incognitus
22732582 22732582 PRJNA207343_S_NODE_10278_length_164_cov_3.464567_g9741_i0 PRJNA207343 10278 164 3.464567 5.68188988 root 1 Root_unresolved Root_unresolved 104 3.73e-18   NTclustered gi|238617605|gb|FJ973380.1| 45107 g9741 i0 86.458 2.34146341463415 96 11 57 2 71 164 2274 2179 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 384 104 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
23319047 23319047 PRJNA207343_S_NODE_7259_length_220_cov_2.601093_g6722_i0 PRJNA207343 7259 220 2.601093 5.7224046 Rosculus cf. ithacus CCAP 1571/3 1808993 SAR_Eukaryotes SAR_Eukaryotes 156 1.44e-33   NTclustered gi|1002343692|gb|KU738570.1| 1808993 g6722 i0 80.556 10.2454545454545 216 30 95 10 11 220 1566 1775 Rosculus cf. ithacus CCAP 1571/3 18S ribosomal RNA gene, partial sequence blastn 2254 156 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus cf. ithacus CCAP 1571/3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;