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contig_metadata

28 rows where analysis = "blastn", bioproject = "PRJNA207343" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Sar · 28 ✖

bioproject 1

  • PRJNA207343 · 28 ✖

analysis 1

  • blastn · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1055999 1055999 PRJNA207343_S_NODE_6341_length_249_cov_5.400943_g5804_i0 PRJNA207343 6341 249 5.400943 13.44834807 Poteriospumella 1117026 SAR_Eukaryotes SAR_Eukaryotes 451 1.9e-122   NTclustered gi|685431582|gb|KF697341.1| 1117027 g5804 i0 100 81.0481927710843 244 0 98 0 6 249 22 265 Poteriospumella lacustris strain JBC07 28S ribosomal RNA gene, partial sequence blastn 20181 451 1 Eukaryota Sar     Chrysophyceae Chromulinales Dinobryaceae Poteriospumella Poteriospumella lacustris
1641804 1641804 PRJNA207343_S_NODE_8362_length_194_cov_3.292994_g7825_i0 PRJNA207343 8362 194 3.292994 6.38840836 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 359 8.809999999999999e-95   NTclustered gi|238617602|gb|FJ973377.1| 188950 g7825 i0 100 27.9948453608247 194 0 100 0 1 194 2911 2718 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 5431 359 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
2917509 2917509 PRJNA207343_S_NODE_3443_length_440_cov_2.091811_g2911_i0 PRJNA207343 3443 440 2.091811 9.2039684 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 532 1.25e-146   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2911 i0 89.302 66.1568181818182 430 38 97 8 1 425 1892 2318 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 29109 532 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
2917621 2917621 PRJNA207343_S_NODE_7563_length_212_cov_3.040000_g7026_i0 PRJNA207343 7563 212 3.04 6.4448 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 255 1.32e-63   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g7026 i0 90.722 72.5377358490566 194 15 91 3 1 193 3682 3873 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 15378 255 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
2917650 2917650 PRJNA207343_S_NODE_8663_length_189_cov_1.243421_g8126_i0 PRJNA207343 8663 189 1.243421 2.35006569 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 344 2.39e-90   NTclustered gi|238617602|gb|FJ973377.1| 188950 g8126 i0 99.471 1 189 1 100 0 1 189 477 665 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 189 344 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
3606409 3606409 PRJNA207343_S_NODE_5083_length_308_cov_146.985240_g4546_i0 PRJNA207343 5083 308 146.98524 452.7145392 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 73.1 2.21e-8   NTclustered gi|1079281417|gb|EF494740.3| 478820 g4546 i0 97.619 65.0064935064935 42 1 14 0 267 308 3544 3585 Blastocystis sp. NandII mitochondrion, complete genome blastn 20022 73.1 1 Eukaryota Sar     Bigyra Opalinata Blastocystidae Blastocystis Blastocystis hominis
4194066 4194066 PRJNA207343_S_NODE_7204_length_221_cov_35.233696_g6667_i0 PRJNA207343 7204 221 35.233696 77.86646816 Synura macracantha 1261423 SAR_Eukaryotes SAR_Eukaryotes 182 2.39e-41   NTclustered gi|859809363|gb|KM590648.1| 1261423 g6667 i0 83.105 63.737556561086 219 17 98 13 4 220 2321 2521 Synura macracantha strain S90B5 26S ribosomal RNA gene, partial sequence blastn 14086 182 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Synura Synura macracantha
7433786 7433786 PRJNA207343_S_NODE_2646_length_551_cov_13.501946_g2135_i0 PRJNA207343 2646 551 13.501946 74.39572246 Spumella 89043 SAR_Eukaryotes SAR_Eukaryotes 645 1.959999999999999e-180   NTclustered gi|2055919756|gb|MZ420314.1| 1955568 g2135 i0 88.172 100.722323049002 558 45 99 16 1 549 1186 1731 Spumella sp. strain Woeam021018A5 large subunit ribosomal RNA gene, partial sequence blastn 55498 645 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella sp.
8020169 8020169 PRJNA207343_S_NODE_10587_length_160_cov_16.691057_g10050_i0 PRJNA207343 10587 160 16.691057 26.7056912 Cercozoa sp. CC-2009d 629762 SAR_Eukaryotes SAR_Eukaryotes 139 9.9e-29   NTclustered gi|290760487|gb|GQ144690.1| 629762 g10050 i0 82.609 70.41875 161 24 100 4 1 160 1471 1628 Cercozoa sp. CC-2009d large subunit ribosomal RNA gene, partial sequence blastn 11267 139 1 Eukaryota Sar   Cercozoa         Cercozoa sp. CC-2009d
8020265 8020265 PRJNA207343_S_NODE_3407_length_443_cov_9.822660_g2875_i0 PRJNA207343 3407 443 9.82266 43.5143838 Hyphochytrium catenoides 42384 SAR_Eukaryotes SAR_Eukaryotes 174 8.77e-39   NTclustered gi|2440064|emb|X80345.1| 42384 g2875 i0 75.626 40.216704288939 439 59 98 29 3 434 2119 1722 H.catenoides gene for 28S ribosomal RNA blastn 17816 174 1 Eukaryota Sar     Hyphochytriomycetes Hyphochytriales Hyphochytriaceae Hyphochytrium Hyphochytrium catenoides
8708532 8708532 PRJNA207343_S_NODE_11407_length_152_cov_2.191304_g10870_i0 PRJNA207343 11407 152 2.191304 3.33078208 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 211 1.94e-50   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g10870 i0 96.154 5.69078947368421 130 3 85 2 18 146 203 331 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 865 211 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
9983916 9983916 PRJNA207343_S_NODE_10568_length_161_cov_1.508065_g10031_i0 PRJNA207343 10568 161 1.508065 2.42798465 Mallomonas 2988 SAR_Eukaryotes SAR_Eukaryotes 152 1.28e-32   NTclustered gi|323690590|gb|GU935649.1| 990301 g10031 i0 86.014 30.7950310559006 143 19 88 1 13 154 2542 2684 Mallomonas matvienkoae var. matvienkoae strain Gungnam052507A 28S ribosomal RNA gene, partial sequence blastn 4958 152 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Mallomonas Mallomonas matvienkoae
10571013 10571013 PRJNA207343_S_NODE_6289_length_251_cov_3.897196_g5752_i0 PRJNA207343 6289 251 3.897196 9.78196196 Rosculus vulgaris 2231165 SAR_Eukaryotes SAR_Eukaryotes 267 7.459999999999999e-67   NTclustered gi|1402550474|gb|MH488760.1| 2231165 g5752 i0 86.747 8.32270916334661 249 22 98 5 7 251 2566 2807 Rosculus vulgaris isolate CCA sequence blastn 2089 267 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus vulgaris
11845410 11845410 PRJNA207343_S_NODE_3050_length_489_cov_16.960177_g2521_i0 PRJNA207343 3050 489 16.960177 82.93526553 Poteriospumella sp. 2003111 SAR_Eukaryotes SAR_Eukaryotes 656 0   NTclustered gi|1209183032|gb|KX100774.1| 2003111 g2521 i0 91.564 45.5848670756646 486 23 98 11 1 477 725 249 Poteriospumella sp. strain D-7-A2 28S ribosomal RNA gene, partial sequence blastn 22291 656 1 Eukaryota Sar     Chrysophyceae Chromulinales Dinobryaceae Poteriospumella Poteriospumella sp.
11845487 11845487 PRJNA207343_S_NODE_5190_length_302_cov_4.532075_g4653_i0 PRJNA207343 5190 302 4.532075 13.6868665 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 466 8.47e-127   NTclustered gi|1402550476|gb|MH488762.1| 2231160 g4653 i0 95.254 56.9403973509934 295 12 97 2 9 302 1965 1672 Rosculus sp. isolate CCAC3 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 17196 466 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
13120845 13120845 PRJNA207343_S_NODE_8791_length_186_cov_7.919463_g8254_i0 PRJNA207343 8791 186 7.919463 14.73020118 Metromonas simplex 281027 SAR_Eukaryotes SAR_Eukaryotes 250 5.25e-62   NTclustered gi|197723534|gb|EF681916.2| 281027 g8254 i0 90.909 100.596774193548 187 16 100 1 1 186 1228 1042 Metromonas simplex strain HFCC68 28S ribosomal RNA gene, partial sequence blastn 18711 250 1 Eukaryota Sar   Cercozoa Imbricatea   Metromonadea Metromonas Metromonas simplex
15083580 15083580 PRJNA207343_S_NODE_9012_length_183_cov_1.164384_g8475_i0 PRJNA207343 9012 183 1.164384 2.13082272 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 63.9 7.2e-6   NTclustered gi|404425900|gb|JX310029.1| 692531 g8475 i0 95.122 19.0655737704918 41 1 22 1 1 40 1943 1903 Sathrophilus holtae voucher FXP2007102402 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 3489 63.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Cinetochilidae Sathrophilus Sathrophilus holtae
16358414 16358414 PRJNA207343_S_NODE_8213_length_197_cov_6.950000_g7676_i0 PRJNA207343 8213 197 6.95 13.6915 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 263 7.239999999999999e-66   NTclustered gi|88792583|gb|DQ386164.1| 372086 g7676 i0 94.22 87.8071065989848 173 9 87 1 18 189 1397 1225 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 17298 263 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
19492870 19492870 PRJNA207343_S_NODE_5136_length_305_cov_9.473881_g4599_i0 PRJNA207343 5136 305 9.473881 28.89533705 Attheya septentrionalis 420275 SAR_Eukaryotes SAR_Eukaryotes 375 1.4899999999999998e-99   NTclustered gi|2632235279|gb|OR922661.1| 420275 g4599 i0 89.18 99.3967213114754 305 28 100 4 1 305 3259 3558 Attheya septentrionalis strain AGSB0004 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 30316 375 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Attheyaceae Attheya Attheya septentrionalis
19492878 19492878 PRJNA207343_S_NODE_5376_length_291_cov_375.728346_g4839_i0 PRJNA207343 5376 291 375.728346 1093.36948686 Poteriospumella sp. 2003111 SAR_Eukaryotes SAR_Eukaryotes 331 3.09e-86   NTclustered gi|1209183032|gb|KX100774.1| 2003111 g4839 i0 94.836 32.7903780068728 213 9 73 1 17 227 238 26 Poteriospumella sp. strain D-7-A2 28S ribosomal RNA gene, partial sequence blastn 9542 331 1 Eukaryota Sar     Chrysophyceae Chromulinales Dinobryaceae Poteriospumella Poteriospumella sp.
19492966 19492966 PRJNA207343_S_NODE_8076_length_200_cov_8.098160_g7539_i0 PRJNA207343 8076 200 8.09816 16.19632 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 165 2.14e-36   NTclustered gi|238617602|gb|FJ973377.1| 188950 g7539 i0 82.564 19.145 195 27 96 7 7 197 2905 2714 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 3829 165 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
22043353 22043353 PRJNA207343_S_NODE_10498_length_161_cov_8.669355_g9961_i0 PRJNA207343 10498 161 8.669355 13.95766155 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 206 9.7e-49   NTclustered gi|88792583|gb|DQ386164.1| 372086 g9961 i0 90.385 103.968944099379 156 15 97 0 6 161 1378 1533 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 16739 206 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
22043452 22043452 PRJNA207343_S_NODE_3698_length_412_cov_33.933333_g3163_i0 PRJNA207343 3698 412 33.933333 139.80533196 uncultured Chrysophyceae 183512 SAR_Eukaryotes SAR_Eukaryotes 383 1.2399999999999996e-101   NTclustered gi|406609805|dbj|AB749080.1| 183512 g3163 i0 93.774 67.2815533980583 257 13 73 3 11 265 889 634 Uncultured chrysophyte gene for 18S ribosomal RNA, partial sequence, clone: Bs-St.5-31 blastn 27720 383 1 Eukaryota Sar     Chrysophyceae       uncultured Chrysophyceae
22043458 22043458 PRJNA207343_S_NODE_3858_length_398_cov_146.542936_g3321_i0 PRJNA207343 3858 398 146.542936 583.24088528 Rosculus incognitus 2231162 SAR_Eukaryotes SAR_Eukaryotes 416 1.17e-111   NTclustered gi|1402550483|gb|MH488769.1| 2231162 g3321 i0 91.973 46.1633165829146 299 20 75 4 101 398 1985 1690 Rosculus incognitus isolate ATCC 50577 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 18373 416 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus incognitus
22732582 22732582 PRJNA207343_S_NODE_10278_length_164_cov_3.464567_g9741_i0 PRJNA207343 10278 164 3.464567 5.68188988 root 1 Root_unresolved Root_unresolved 104 3.73e-18   NTclustered gi|238617605|gb|FJ973380.1| 45107 g9741 i0 86.458 2.34146341463415 96 11 57 2 71 164 2274 2179 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 384 104 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
23319047 23319047 PRJNA207343_S_NODE_7259_length_220_cov_2.601093_g6722_i0 PRJNA207343 7259 220 2.601093 5.7224046 Rosculus cf. ithacus CCAP 1571/3 1808993 SAR_Eukaryotes SAR_Eukaryotes 156 1.44e-33   NTclustered gi|1002343692|gb|KU738570.1| 1808993 g6722 i0 80.556 10.2454545454545 216 30 95 10 11 220 1566 1775 Rosculus cf. ithacus CCAP 1571/3 18S ribosomal RNA gene, partial sequence blastn 2254 156 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus cf. ithacus CCAP 1571/3
25282024 25282024 PRJNA207343_S_NODE_6000_length_262_cov_12.942222_g5463_i0 PRJNA207343 6000 262 12.942222 33.90862164 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 99 3.03e-16   NTclustered gi|2757671034|gb|PQ008779.1| 2990 g5463 i0 98.214 32.5076335877863 56 1 36 0 11 66 1841 1896 Mallomonas striata strain CZ04D internal transcribed spacer 2 and large subunit ribosomal RNA gene, partial sequence blastn 8517 100 0.99 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Mallomonas Mallomonas striata
25282063 25282063 PRJNA207343_S_NODE_7880_length_204_cov_47.329341_g7343_i0 PRJNA207343 7880 204 47.329341 96.55185564 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 309 9.56e-80   NTclustered gi|157411037|gb|EF990208.1| 3013 g7343 i0 95.361 95.1029411764706 194 9 95 0 11 204 2739 2546 Fucus gardneri large subunit ribosomal RNA gene, partial sequence blastn 19401 309 1 Eukaryota Sar     Phaeophyceae Fucales Fucaceae Fucus Fucus gardneri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;