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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA206070" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA206070 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
366355 366355 PRJNA206070_S_NODE_22841_length_185_cov_2.898649_g20965_i0 PRJNA206070 22841 185 2.898649 5.36250065 Hyla sarda 327740 Chordata Chordata 52.8 0.016   NTclustered gi|2512160518|ref|XM_056558461.1| 327740 g20965 i0 100 2.87567567567568 28 0 15 0 1 28 3951 3978 PREDICTED: Hyla sarda MAX network transcriptional repressor (MNT), transcript variant X2, mRNA blastn 532 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Hylidae Hyla Hyla sarda
366566 366566 PRJNA206070_S_NODE_4821_length_775_cov_2.415989_g3083_i0 PRJNA206070 4821 775 2.415989 18.72391475 Canis lupus 9612 Chordata Chordata 1101 0   NTclustered gi|190576522|gb|AC186968.15| 9615 g3083 i0 92.387 49.0245161290323 775 55 100 3 3 775 66446 65674 Canis familiaris chromosome 3, clone XX-219I19, complete sequence blastn 37994 1101 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Canis Canis lupus
1640826 1640826 PRJNA206070_S_NODE_10222_length_375_cov_2.150888_g8347_i0 PRJNA206070 10222 375 2.150888 8.06583 Balaenoptera acutorostrata 9767 Chordata Chordata 58.4 7.67e-4   NTclustered gi|2526559425|ref|XR_452228.3| 9767 g8347 i0 100 0.0826666666666667 31 0 8 0 48 78 2770 2740 PREDICTED: Balaenoptera acutorostrata uncharacterized LOC103019002 (LOC103019002), ncRNA blastn 31 58.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Balaenopteridae Balaenoptera Balaenoptera acutorostrata
4193559 4193559 PRJNA206070_S_NODE_27944_length_161_cov_1.032258_g26068_i0 PRJNA206070 27944 161 1.032258 1.66193538 Balaenoptera acutorostrata 9767 Chordata Chordata 54.7 0.004   NTclustered gi|2526559425|ref|XR_452228.3| 9767 g26068 i0 100 0.180124223602484 29 0 18 0 63 91 2770 2742 PREDICTED: Balaenoptera acutorostrata uncharacterized LOC103019002 (LOC103019002), ncRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Balaenopteridae Balaenoptera Balaenoptera acutorostrata
6158290 6158290 PRJNA206070_S_NODE_14125_length_280_cov_2.510288_g12249_i0 PRJNA206070 14125 280 2.510288 7.0288064 Canis 9611 Chordata Chordata 507 4.58e-139   NTclustered gi|2671958728|tpg|BK065026.1| 9615 g12249 i0 99.286 550.775 280 2 100 0 1 280 215539 215818 TPA: Canis lupus familiaris breed boxer TRA/TRD locus, complete sequence blastn 154217 512 0.990234375 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Canis Canis lupus
11844716 11844716 PRJNA206070_S_NODE_14470_length_274_cov_1.308017_g12594_i0 PRJNA206070 14470 274 1.308017 3.58396658 Canis lupus 9612 Chordata Chordata 451 2.12e-122   NTclustered gi|124001724|gb|AC186959.6| 9615 g12594 i0 96.35 278.770072992701 274 10 100 0 1 274 98104 97831 Canis Familiaris chromosome 9, clone XX-196G23, complete sequence blastn 76383 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Canis Canis lupus
11844971 11844971 PRJNA206070_S_NODE_24150_length_178_cov_0.921986_g22274_i0 PRJNA206070 24150 178 0.921986 1.64113508 Canis lupus 9612 Chordata Chordata 318 1.34e-82   NTclustered gi|45504247|gb|AC147784.3| 9615 g22274 i0 98.883 206.938202247191 179 1 100 1 1 178 85048 84870 Canis Familiaris, clone XX-25F3, complete sequence blastn 36835 318 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Canis Canis lupus
11844995 11844995 PRJNA206070_S_NODE_25350_length_171_cov_7.470149_g23474_i0 PRJNA206070 25350 171 7.470149 12.77395479 Polypterus senegalus 55291 Chordata Chordata 202 1.34e-47   NTclustered gi|1993956580|ref|XM_039752052.1| 55291 g23474 i0 91.216 15.9707602339181 148 13 87 0 24 171 2674 2527 PREDICTED: Polypterus senegalus E3 SUMO-protein ligase ZBED1-like (LOC120528061), transcript variant X1, mRNA blastn 2731 202 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
13119942 13119942 PRJNA206070_S_NODE_13631_length_289_cov_19834.595238_g11755_i0 PRJNA206070 13631 289 19834.595238 57321.98023782 Saccopteryx leptura 249018 Chordata Chordata 344 3.94e-90   NTclustered gi|2756186286|ref|XR_010750705.1| 249018 g11755 i0 92.063 84.159169550173 252 9 86 9 37 284 1242 998 PREDICTED: Saccopteryx leptura 28S ribosomal RNA (LOC136401697), rRNA blastn 24322 344 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Emballonuridae Saccopteryx Saccopteryx leptura
15669017 15669017 PRJNA206070_S_NODE_15993_length_250_cov_8.868545_g14117_i0 PRJNA206070 15993 250 8.868545 22.1713625 Polypterus senegalus 55291 Chordata Chordata 195 3.55e-45   NTclustered gi|1993937637|ref|XM_039741126.1| 55291 g14117 i0 89.677 6.984 155 13 61 3 1 153 1326 1173 PREDICTED: Polypterus senegalus E3 SUMO-protein ligase ZBED1-like (LOC120518358), transcript variant X2, mRNA blastn 1746 195 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
15669033 15669033 PRJNA206070_S_NODE_16613_length_242_cov_1.848780_g14737_i0 PRJNA206070 16613 242 1.84878 4.4740476 Canis lupus 9612 Chordata Chordata 442 1.1099999999999995e-119   NTclustered gi|111378431|gb|AC187025.7| 9615 g14737 i0 99.587 288.888429752066 242 1 100 0 1 242 146550 146309 Canis Familiaris chromosome 31, clone XX-251H2, complete sequence blastn 69911 442 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Canis Canis lupus
17633206 17633206 PRJNA206070_S_NODE_15174_length_262_cov_3.937778_g13298_i0 PRJNA206070 15174 262 3.937778 10.31697836 Lampetra 13103 Chordata Chordata 54.7 0.007   NTclustered gi|2805717555|emb|OZ078437.1| 7748 g13298 i0 96.875 0.366412213740458 32 1 12 0 11 42 5750083 5750052 Lampetra fluviatilis genome assembly, chromosome: 34 blastn 96 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Lampetra Lampetra fluviatilis
20767991 20767991 PRJNA206070_S_NODE_27217_length_163_cov_2.801587_g25341_i0 PRJNA206070 27217 163 2.801587 4.56658681 Rousettus aegyptiacus 9407 Chordata Chordata 52.8 0.014   NTclustered gi|1910340942|ref|XM_016124325.2| 9407 g25341 i0 100 0.687116564417178 28 0 17 0 19 46 4955 4928 PREDICTED: Rousettus aegyptiacus nebulette (LOC107499789), transcript variant X3, mRNA blastn 112 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Rousettus Rousettus aegyptiacus
24592869 24592869 PRJNA206070_S_NODE_6520_length_567_cov_7.373585_g4672_i0 PRJNA206070 6520 567 7.373585 41.80822695 Gallus gallus 9031 Chordata Chordata 1048 0   NTclustered gi|2201755425|ref|XR_006936394.1| 9031 g4672 i0 100 61.4109347442681 567 0 100 0 1 567 1237 671 PREDICTED: Gallus gallus 28S ribosomal RNA (LOC121106977), rRNA blastn 34820 1048 1 Eukaryota Opisthokonta Metazoa Chordata Aves Galliformes Phasianidae Gallus Gallus gallus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;