RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA206070" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 7 ✖

bioproject 1

  • PRJNA206070 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1055847 1055847 PRJNA206070_S_NODE_8501_length_440_cov_29.684864_g6629_i0 PRJNA206070 8501 440 29.684864 130.6134016 root 1 Root_unresolved Root_unresolved 804 0   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g6629 i0 100 98.8636363636364 435 0 99 0 1 435 18066 18500 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 43500 804 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
8708272 8708272 PRJNA206070_S_NODE_12307_length_316_cov_4.677419_g10431_i0 PRJNA206070 12307 316 4.677419 14.78064404 root 1 Root_unresolved Root_unresolved 584 2.359999999999999e-162   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g10431 i0 100 100 316 0 100 0 1 316 15023 14708 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 31600 584 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
13809003 13809003 PRJNA206070_S_NODE_18051_length_225_cov_1.765957_g16175_i0 PRJNA206070 18051 225 1.765957 3.97340325 root 1 Root_unresolved Root_unresolved 416 6.159999999999998e-112   NTclustered gi|56160492|ref|AC_000007.1| 10515 g16175 i0 100 100 225 0 100 0 1 225 11906 12130 Human adenovirus 2, complete genome blastn 22500 416 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
15083314 15083314 PRJNA206070_S_NODE_5112_length_727_cov_8.473913_g3345_i0 PRJNA206070 5112 727 8.473913 61.60534751 root 1 Root_unresolved Root_unresolved 1323 0   NTclustered gi|2648012273|gb|PP079214.1| 10515 g3345 i0 99.723 99.4497936726272 723 1 99 1 1 722 11887 11165 Human adenovirus 2 isolate HAdV-C2/USA/9C10/2012, complete genome blastn 72300 1328 0.996234939759036 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
17633249 17633249 PRJNA206070_S_NODE_20134_length_204_cov_12.233533_g18258_i0 PRJNA206070 20134 204 12.233533 24.95640732 root 1 Root_unresolved Root_unresolved 368 1.56e-97   NTclustered gi|2620236085|gb|OR777220.1| 10515 g18258 i0 100 97.5490196078431 199 0 98 0 1 199 15025 15223 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 19900 368 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
18907142 18907142 PRJNA206070_S_NODE_27235_length_163_cov_2.476190_g25359_i0 PRJNA206070 27235 163 2.47619 4.0361897 root 1 Root_unresolved Root_unresolved 302 1.22e-77   NTclustered gi|56160492|ref|AC_000007.1| 10515 g25359 i0 100 100 163 0 100 0 1 163 10861 11023 Human adenovirus 2, complete genome blastn 16300 302 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
24007669 24007669 PRJNA206070_S_NODE_28739_length_158_cov_1.859504_g26863_i0 PRJNA206070 28739 158 1.859504 2.93801632 root 1 Root_unresolved Root_unresolved 281 1.53e-71   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g26863 i0 100 96.2025316455696 152 0 96 0 1 152 13095 12944 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 15200 281 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;