RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA195897" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 6 ✖

bioproject 1

  • PRJNA195897 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
365998 365998 PRJNA195897_P_NODE_5181_length_212_cov_2.092025_g5148_i0 PRJNA195897 5181 212 2.092025 4.435093 Plotvirus plot 2170099 Viruses Viruses 62.1 3.1e-5   NTclustered gi|1720702708|gb|MN119378.1| 2596982 g5148 i0 91.489 1 47 1 21 2 112 155 45867 45913 Mycobacterium phage Penelope2018, complete genome blastn 212 62.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Plotvirus Plotvirus plot
1640753 1640753 PRJNA195897_P_NODE_2_length_8153_cov_6.682379_g1_i0 PRJNA195897 2 8153 6.682379 544.81435987 Perth bee virus 4 2201298 Viruses Viruses 2713 0   NTclustered gi|1390040502|gb|MG995733.1| 2201298 g1 i0 76.558 1.16190359376916 5072 1118 62 64 3118 8153 1981 7017 Perth bee virus 4 isolate WA2-63 nonstructural polyprotein gene, partial cds; and structural polyprotein gene, complete cds blastn 9473 2713 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Perth bee virus 4
8019373 8019373 PRJNA195897_P_NODE_5167_length_213_cov_0.951220_g5134_i0 PRJNA195897 5167 213 0.95122 2.0260986 Pandoravirus neocaledonia 2107708 Viruses Viruses 176 1.07e-39   NTclustered gi|1408258530|ref|NC_037666.1| 2107708 g5134 i0 83.784 72.5117370892019 185 30 87 0 5 189 1577058 1576874 Pandoravirus neocaledonia, complete genome blastn 15445 176 1 Viruses             Pandoravirus Pandoravirus neocaledonia
15668778 15668778 PRJNA195897_P_NODE_3173_length_275_cov_1.610619_g3140_i0 PRJNA195897 3173 275 1.610619 4.42920225 Guapo partitivirus 3078405 Viruses Viruses 206 1.83e-48   NTclustered gi|2583640776|gb|OQ968299.1| 3078405 g3140 i0 83.333 10.2436363636364 222 37 81 0 26 247 740 519 MAG: Guapo partitivirus isolate JARP31 genomic sequence blastn 2817 206 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Guapo partitivirus
18217674 18217674 PRJNA195897_P_NODE_3195_length_274_cov_1.413333_g3162_i0 PRJNA195897 3195 274 1.413333 3.87253242 Indivirus ILV1 1977633 Viruses Viruses 108 5.3e-19   NTclustered gi|1174570775|gb|KY684086.1| 1977633 g3162 i0 83.333 0.693430656934307 120 17 43 3 120 238 146633 146516 Indivirus ILV1 isolate ILV1 clone Indivirus_2, sequence blastn 190 108 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Indivirus Indivirus ILV1
19491995 19491995 PRJNA195897_P_NODE_496_length_760_cov_6.291139_g468_i0 PRJNA195897 496 760 6.291139 47.8126564 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 632 2.1399999999999996e-176   NTclustered gi|2754691651|gb|PP872615.1| 3003959 g468 i0 82.072 0.990789473684211 753 124 99 10 11 759 8526 9271 MAG: Picornavirales sp. isolate TC-PLV-59 MR233-17E/322 genomic sequence blastn 753 632 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;