RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA195897" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA195897 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1055318 1055318 PRJNA195897_P_NODE_1781_length_387_cov_1.831361_g1748_i0 PRJNA195897 1781 387 1.831361 7.08736707 Brachionus 10194 Rotifera other_Eukaryota 291 7.19e-74   NTclustered gi|1802791198|gb|MN256531.1| 392764 g1748 i0 81.25 67.3307493540052 384 50 96 15 10 382 11630 11258 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 26057 291 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
2916675 2916675 PRJNA195897_P_NODE_503_length_754_cov_2.436879_g475_i0 PRJNA195897 503 754 2.436879 18.37406766 Brachionus koreanus 1199090 Rotifera other_Eukaryota 387 1.82e-102   NTclustered gi|477541861|gb|KC603850.1| 1199090 g475 i0 78.296 48.7214854111406 622 120 82 15 138 752 6433 7046 Brachionus sp. 'koreanus' chromosome II mitochondrion, complete sequence blastn 36736 387 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus koreanus
5469305 5469305 PRJNA195897_P_NODE_205_length_1103_cov_9.005693_g189_i0 PRJNA195897 205 1103 9.005693 99.33279379 Brachionus rubens 392764 Rotifera other_Eukaryota 398 1.2499999999999997e-105   NTclustered gi|1802791198|gb|MN256531.1| 392764 g189 i0 76.873 16.388939256573 761 141 67 30 1 744 11821 11079 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 18077 398 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;