RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA195897" and tax_phylum = "Nemertea"

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tax_superkingdom 1

tax_phylum 1

  • Nemertea · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA195897 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15668837 15668837 PRJNA195897_P_NODE_953_length_545_cov_3.864919_g922_i0 PRJNA195897 953 545 3.864919 21.06380855 Lineus viridis 56195 Nemertea other_Eukaryota 171 1.4199999999999998e-37   NTclustered gi|166952326|gb|EU302557.1| 56195 g922 i0 77.941 12.9761467889908 272 60 50 0 235 506 289 18 Lineus viridis ribosomal protein rpl37a mRNA, complete cds blastn 7072 171 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus viridis
24007281 24007281 PRJNA195897_P_NODE_5299_length_210_cov_1.608696_g5266_i0 PRJNA195897 5299 210 1.608696 3.3782616 Opisthokonta 33154 Nemertea other_Eukaryota 84.2 6.53e-12   NTclustered gi|2724540083|ref|XM_064783096.1| 88925 g5266 i0 80.734 6.87142857142857 109 19 51 2 103 210 850 743 PREDICTED: Lineus longissimus large ribosomal subunit protein uL2-like (LOC135494808), mRNA blastn 1443 84.2 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;