contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA195897" and tax_phylum = "Nematoda"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2916621 | 2916621 | PRJNA195897_P_NODE_1263_length_472_cov_10.801418_g1231_i0 | PRJNA195897 | 1263 | 472 | 10.801418 | 50.98269296 | Pristionchus pauli | 376545 | Nematoda | Nematoda | 292 | 2.48e-74 | NTclustered | gi|150982019|gb|EF634598.1| | 376545 | g1231 | i0 | 81.492 | 4.77966101694915 | 362 | 61 | 76 | 6 | 48 | 406 | 395 | 37 | Pristionchus pauli large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds | blastn | 2256 | 292 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus pauli | |
| 4193055 | 4193055 | PRJNA195897_P_NODE_1944_length_368_cov_2.639498_g1911_i0 | PRJNA195897 | 1944 | 368 | 2.639498 | 9.71335264 | Fictor sp. 2 VS-2014 | 1538695 | Nematoda | Nematoda | 182 | 4.27e-41 | NTclustered | gi|675118979|gb|KJ877369.1| | 1538695 | g1911 | i0 | 82.297 | 3.52445652173913 | 209 | 35 | 57 | 2 | 73 | 280 | 399 | 192 | Fictor sp. 2 VS-2014 strain RS9002 large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds | blastn | 1297 | 182 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Fictor | Fictor sp. 2 VS-2014 | |
| 4193120 | 4193120 | PRJNA195897_P_NODE_984_length_538_cov_10.449898_g953_i0 | PRJNA195897 | 984 | 538 | 10.449898 | 56.22045124 | Pristionchus hoplostomus | 1355913 | Nematoda | Nematoda | 167 | 1.81e-36 | NTclustered | gi|524845312|gb|KC819366.1| | 1355913 | g953 | i0 | 81.166 | 24.7918215613383 | 223 | 28 | 40 | 11 | 75 | 290 | 49 | 264 | Pristionchus hoplostomus strain JU1090 subunit ribosomal protein 20 (rps-20) mRNA, partial cds | blastn | 13338 | 167 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus hoplostomus | |
| 8019395 | 8019395 | PRJNA195897_P_NODE_8847_length_169_cov_2.166667_g8814_i0 | PRJNA195897 | 8847 | 169 | 2.166667 | 3.66166723 | Pristionchus sp. 11 RS5228 | 452806 | Nematoda | Nematoda | 135 | 1.3600000000000002e-27 | NTclustered | gi|150984677|gb|EF635000.1| | 452806 | g8814 | i0 | 86.047 | 38.3195266272189 | 129 | 15 | 75 | 1 | 32 | 157 | 201 | 73 | Pristionchus sp. 11 RS5228 small subunit ribosomal protein 28 (rps-28) mRNA, complete cds | blastn | 6476 | 135 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus sp. 11 RS5228 | |
| 9294055 | 9294055 | PRJNA195897_P_NODE_2608_length_309_cov_2.011538_g2575_i0 | PRJNA195897 | 2608 | 309 | 2.011538 | 6.21565242 | Brugia malayi | 6279 | Nematoda | Nematoda | 159 | 1.65e-34 | NTclustered | gi|2082273969|ref|XM_001902266.2| | 6279 | g2575 | i0 | 81.068 | 34.1229773462783 | 206 | 33 | 66 | 6 | 2 | 204 | 139 | 341 | Brugia malayi ubiquitin-like protein, putative (Bma-ubq-2), partial mRNA | blastn | 10544 | 159 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Onchocercidae | Brugia | Brugia malayi | |
| 13119754 | 13119754 | PRJNA195897_P_NODE_2411_length_323_cov_7.704380_g2378_i0 | PRJNA195897 | 2411 | 323 | 7.70438 | 24.8851474 | Caenorhabditis remanei | 31234 | Nematoda | Nematoda | 78.7 | 5e-10 | NTclustered | gi|2445352248|ref|XM_053723719.1| | 31234 | g2378 | i0 | 94.118 | 0.554179566563467 | 51 | 3 | 16 | 0 | 227 | 277 | 282 | 232 | Caenorhabditis remanei uncharacterized protein (GCK72_002963), partial mRNA | blastn | 179 | 78.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis remanei | |
| 14395103 | 14395103 | PRJNA195897_P_NODE_9252_length_169_cov_0.866667_g9219_i0 | PRJNA195897 | 9252 | 169 | 0.866667 | 1.46466723 | Caenorhabditis briggsae | 6238 | Nematoda | Nematoda | 104 | 3.84e-18 | NTclustered | gi|268534083|ref|XM_002632126.1| | 6238 | g9219 | i0 | 82.5 | 1.59763313609467 | 120 | 19 | 70 | 2 | 11 | 129 | 284 | 166 | Caenorhabditis briggsae Protein CBG07031 (CBG07031), partial mRNA | blastn | 270 | 104 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis briggsae | |
| 15082844 | 15082844 | PRJNA195897_P_NODE_7252_length_185_cov_1.529412_g7219_i0 | PRJNA195897 | 7252 | 185 | 1.529412 | 2.8294122 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 54.7 | 0.004 | NTclustered | gi|1366767161|gb|AC277404.1| | 51029 | g7219 | i0 | 100 | 4.55135135135135 | 29 | 0 | 16 | 0 | 157 | 185 | 307 | 279 | Heterodera glycines strain TN20 clone GNFT81-D04, complete sequence | blastn | 842 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Heteroderidae | Heterodera | Heterodera glycines | |
| 18217699 | 18217699 | PRJNA195897_P_NODE_6655_length_192_cov_1.090909_g6622_i0 | PRJNA195897 | 6655 | 192 | 1.090909 | 2.09454528 | Caenorhabditis remanei | 31234 | Nematoda | Nematoda | 117 | 5.78e-22 | NTclustered | gi|2445362618|ref|XM_003094595.2| | 31234 | g6622 | i0 | 89.247 | 19.6979166666667 | 93 | 10 | 48 | 0 | 100 | 192 | 301 | 209 | Caenorhabditis remanei uncharacterized protein (GCK72_008429), partial mRNA | blastn | 3782 | 117 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis remanei | |
| 20767553 | 20767553 | PRJNA195897_P_NODE_8357_length_174_cov_1.248000_g8324_i0 | PRJNA195897 | 8357 | 174 | 1.248 | 2.17152 | Bursaphelenchus xylophilus | 6326 | Nematoda | Nematoda | 108 | 3.08e-19 | NTclustered | gi|268619113|gb|GU130140.1| | 6326 | g8324 | i0 | 78.916 | 2.35057471264368 | 166 | 29 | 94 | 3 | 3 | 165 | 167 | 5 | Bursaphelenchus xylophilus 60S ribosomal protein L8 mRNA, complete cds | blastn | 409 | 108 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Aphelenchoididae | Bursaphelenchus | Bursaphelenchus xylophilus | |
| 22042621 | 22042621 | PRJNA195897_P_NODE_4698_length_221_cov_1.825581_g4665_i0 | PRJNA195897 | 4698 | 221 | 1.825581 | 4.03453401 | Pristionchus sp. 13 RS5231 | 452807 | Nematoda | Nematoda | 82.4 | 2.5e-11 | NTclustered | gi|150982219|gb|EF634698.1| | 452807 | g4665 | i0 | 87.324 | 1.78733031674208 | 71 | 9 | 32 | 0 | 116 | 186 | 71 | 1 | Pristionchus sp. 13 RS5231 large subunit ribosomal protein 29 (rpl-29) mRNA, complete cds | blastn | 395 | 82.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus sp. 13 RS5231 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;