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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA195897" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA195897 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
365941 365941 PRJNA195897_P_NODE_1201_length_486_cov_1.432494_g1170_i0 PRJNA195897 1201 486 1.432494 6.96192084 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 71.3 1.31e-7   NTclustered gi|470394136|ref|XM_004334911.1| 1257118 g1170 i0 100 7.1440329218107 38 0 8 0 354 391 1687 1724 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_096160), partial mRNA blastn 3472 71.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4193060 4193060 PRJNA195897_P_NODE_2324_length_331_cov_1.049645_g2291_i0 PRJNA195897 2324 331 1.049645 3.47432495 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 154 8.31e-33   NTclustered gi|470526295|ref|XM_004356679.1| 1257118 g2291 i0 86.014 31.9395770392749 143 20 43 0 37 179 2210 2352 Acanthamoeba castellanii str. Neff vacuolar proton ATPase, putative (ACA1_175060), partial mRNA blastn 10572 154 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4193065 4193065 PRJNA195897_P_NODE_284_length_971_cov_1.940347_g264_i0 PRJNA195897 284 971 1.940347 18.84076937 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 558 4.75e-154   NTclustered gi|470439766|ref|XM_004339180.1| 1257118 g264 i0 77.351 12.0741503604531 989 194 100 23 1 971 1518 542 Acanthamoeba castellanii str. Neff Inositol3-phosphate synthase (ACA1_058810), partial mRNA blastn 11724 558 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5469311 5469311 PRJNA195897_P_NODE_2305_length_332_cov_1.363958_g2272_i0 PRJNA195897 2305 332 1.363958 4.52834056 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 147 1.39e-30   NTclustered gi|470439750|ref|XM_004339178.1| 1257118 g2272 i0 76.552 6.85542168674699 290 54 85 10 1 283 283 1 Acanthamoeba castellanii str. Neff GDPassociated inhibitor, putative (ACA1_058790), partial mRNA blastn 2276 147 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9294087 9294087 PRJNA195897_P_NODE_668_length_662_cov_3.920065_g638_i0 PRJNA195897 668 662 3.920065 25.9508303 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 56.5 0.005   NTclustered gi|470378920|ref|XM_004333477.1| 1257118 g638 i0 94.444 0.054380664652568 36 2 5 0 514 549 43 78 Acanthamoeba castellanii str. Neff Actobindin, putative (ACA1_256510), partial mRNA blastn 36 56.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13119775 13119775 PRJNA195897_P_NODE_491_length_764_cov_3.464336_g463_i0 PRJNA195897 491 764 3.464336 26.46752704 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 479 2.9699999999999986e-130   NTclustered gi|470484553|ref|XM_004344028.1| 1257118 g463 i0 80.507 39.2068062827225 631 117 82 5 1 628 723 96 Acanthamoeba castellanii str. Neff Sadenosyl-L-homocysteine hydrolase, putative (ACA1_054200), partial mRNA blastn 29954 479 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14395090 14395090 PRJNA195897_P_NODE_7832_length_179_cov_1.200000_g7799_i0 PRJNA195897 7832 179 1.2 2.148 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 65.8 1.95e-6   NTclustered gi|470437282|ref|XM_004338924.1| 1257118 g7799 i0 93.182 0.245810055865922 44 3 25 0 136 179 922 879 Acanthamoeba castellanii str. Neff adenine nucleotide translocator, putative (ACA1_128450), partial mRNA blastn 44 65.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15668785 15668785 PRJNA195897_P_NODE_3893_length_244_cov_1.174359_g3860_i0 PRJNA195897 3893 244 1.174359 2.86543596 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 148 2.7299999999999997e-31   NTclustered gi|470525569|ref|XM_004356569.1| 1257118 g3860 i0 79.654 1.17622950819672 231 27 87 5 32 243 944 715 Acanthamoeba castellanii str. Neff mitochondrial phosphate transporter, putative (ACA1_173800), partial mRNA blastn 287 148 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15668840 15668840 PRJNA195897_P_NODE_973_length_541_cov_9.495935_g942_i0 PRJNA195897 973 541 9.495935 51.37300835 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 231 6.3599999999999985e-56   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g942 i0 80.464 55.5064695009242 302 59 56 0 141 442 121 422 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30029 231 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16943239 16943239 PRJNA195897_P_NODE_1854_length_379_cov_1.621212_g1821_i0 PRJNA195897 1854 379 1.621212 6.14439348 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 137 9.69e-28   NTclustered gi|470428251|ref|XM_004338026.1| 1257118 g1821 i0 79.787 0.934036939313984 188 38 50 0 96 283 693 506 Acanthamoeba castellanii str. Neff TolAlike protein (ACA1_224400), partial mRNA blastn 354 137 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16943268 16943268 PRJNA195897_P_NODE_4054_length_238_cov_1.100529_g4021_i0 PRJNA195897 4054 238 1.100529 2.61925902 Vannella sp. 1973054 Discosea other_Eukaryota 361 3.1299999999999995e-95   NTclustered gi|2169663314|gb|OL989990.1| 1973054 g4021 i0 94.142 77.8739495798319 239 11 100 3 1 238 1798 1562 Vannella sp. isolate P147 small subunit ribosomal RNA gene, partial sequence blastn 18534 361 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp.
18217644 18217644 PRJNA195897_P_NODE_1335_length_459_cov_1.773171_g1302_i0 PRJNA195897 1335 459 1.773171 8.13885489 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 296 1.86e-75   NTclustered gi|470492456|ref|XM_004345964.1| 1257118 g1302 i0 81.039 47.4923747276688 385 61 83 11 76 454 137 515 Acanthamoeba castellanii str. Neff 26S protease regulatory subunit 6B family protein (ACA1_184160), partial mRNA blastn 21799 296 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19492016 19492016 PRJNA195897_P_NODE_7716_length_180_cov_1.190840_g7683_i0 PRJNA195897 7716 180 1.19084 2.143512 Parvamoeba rugata 1076758 Discosea other_Eukaryota 171 4.0399999999999996e-38   NTclustered gi|1914009762|gb|MT975637.1| 1076758 g7683 i0 97.03 53.8388888888889 101 3 56 0 80 180 436 536 Parvamoeba rugata clone 1 actin gene, partial cds blastn 9691 171 1 Eukaryota Amoebozoa   Discosea   Himatismenida   Parvamoeba Parvamoeba rugata
20767500 20767500 PRJNA195897_P_NODE_2377_length_327_cov_1.208633_g2344_i0 PRJNA195897 2377 327 1.208633 3.95222991 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 191 6.25e-44   NTclustered gi|470392349|ref|XM_004334716.1| 1257118 g2344 i0 78.165 1.37003058103976 316 57 95 11 6 315 265 574 Acanthamoeba castellanii str. Neff Non-specific lipid-transfer protein (ACA1_092850), partial mRNA blastn 448 191 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;