contig_metadata
27 rows where analysis = "blastn", bioproject = "PRJNA195897" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2330579 | 2330579 | PRJNA195897_P_NODE_2162_length_345_cov_1.986486_g2129_i0 | PRJNA195897 | 2162 | 345 | 1.986486 | 6.8533767 | root | 1 | Root_unresolved | Root_unresolved | 612 | 1.19e-170 | NTclustered | gi|152002890|gb|EF990662.1| | 1308 | g2129 | i0 | 98.559 | 239.489855072464 | 347 | 3 | 100 | 2 | 1 | 345 | 20 | 366 | Streptococcus thermophilus strain T1 16S ribosomal RNA gene, partial sequence | blastn | 82624 | 612 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus thermophilus | ||
| 2330589 | 2330589 | PRJNA195897_P_NODE_5702_length_204_cov_1.000000_g5669_i0 | PRJNA195897 | 5702 | 204 | 1 | 2.04 | Bacillati | 1783272 | Bacteria | Bacteria | 71.3 | 4.91e-8 | NTclustered | gi|552063405|gb|CP006766.1| | 1399116 | g5669 | i0 | 95.556 | 3.1078431372549 | 45 | 0 | 21 | 2 | 140 | 182 | 1344820 | 1344864 | Lactococcus lactis subsp. lactis KLDS 4.0325 chromosome, complete genome | blastn | 634 | 71.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Lactococcus lactis | ||
| 2330592 | 2330592 | PRJNA195897_P_NODE_7362_length_184_cov_1.155556_g7329_i0 | PRJNA195897 | 7362 | 184 | 1.155556 | 2.12622304 | Dolosigranulum | 29393 | Bacteria | Bacteria | 335 | 1.3899999999999996e-87 | NTclustered | gi|2020688450|gb|CP040410.1| | 29394 | g7329 | i0 | 99.457 | 148.826086956522 | 184 | 1 | 100 | 0 | 1 | 184 | 898535 | 898352 | Dolosigranulum pigrum strain KPL3264 chromosome | blastn | 27384 | 335 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Dolosigranulum | Dolosigranulum pigrum | ||
| 2330595 | 2330595 | PRJNA195897_P_NODE_8102_length_176_cov_1.637795_g8069_i0 | PRJNA195897 | 8102 | 176 | 1.637795 | 2.8825192 | Dolosigranulum | 29393 | Bacteria | Bacteria | 326 | 7.92e-85 | NTclustered | gi|2020681836|gb|CP040413.1| | 29394 | g8069 | i0 | 100 | 541.573863636364 | 176 | 0 | 100 | 0 | 1 | 176 | 427339 | 427514 | Dolosigranulum pigrum strain KPL3246 chromosome, complete genome | blastn | 95317 | 326 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Dolosigranulum | Dolosigranulum pigrum | ||
| 4883270 | 4883270 | PRJNA195897_P_NODE_2144_length_348_cov_1.257525_g2111_i0 | PRJNA195897 | 2144 | 348 | 1.257525 | 4.376187 | Staphylococcus | 1279 | Bacteria | Bacteria | 599 | 9.389999999999997e-167 | NTclustered | gi|1928723242|gb|CP042341.1| | 29388 | g2111 | i0 | 97.701 | 525.005747126437 | 348 | 8 | 100 | 0 | 1 | 348 | 783634 | 783287 | Staphylococcus capitis strain BN2 chromosome, complete genome | blastn | 182702 | 599 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus capitis | ||
| 8019338 | 8019338 | PRJNA195897_P_NODE_1947_length_368_cov_2.282132_g1914_i0 | PRJNA195897 | 1947 | 368 | 2.282132 | 8.39824576 | Bacillus mycoides | 1405 | Bacteria | Bacteria | 60.2 | 2.09e-4 | NTclustered | gi|2049754127|gb|CP036116.1| | 1405 | g1914 | i0 | 100 | 1.33423913043478 | 32 | 0 | 9 | 0 | 158 | 189 | 74393 | 74362 | Bacillus mycoides strain JAS481 plasmid p124 | blastn | 491 | 60.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus mycoides | ||
| 11258498 | 11258498 | PRJNA195897_P_NODE_11829_length_163_cov_1.175439_g11796_i0 | PRJNA195897 | 11829 | 163 | 1.175439 | 1.91596557 | Streptococcus | 1301 | Bacteria | Bacteria | 296 | 5.68e-76 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g11796 | i0 | 99.387 | 328.055214723926 | 163 | 1 | 100 | 0 | 1 | 163 | 1569364 | 1569526 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 53473 | 296 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 12533945 | 12533945 | PRJNA195897_P_NODE_4590_length_224_cov_1.097143_g4557_i0 | PRJNA195897 | 4590 | 224 | 1.097143 | 2.45760032 | Dolosigranulum | 29393 | Bacteria | Bacteria | 403 | 4.7699999999999995e-108 | NTclustered | gi|2020681836|gb|CP040413.1| | 29394 | g4557 | i0 | 99.107 | 475.044642857143 | 224 | 2 | 100 | 0 | 1 | 224 | 428238 | 428461 | Dolosigranulum pigrum strain KPL3246 chromosome, complete genome | blastn | 106410 | 403 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Dolosigranulum | Dolosigranulum pigrum | ||
| 13119719 | 13119719 | PRJNA195897_P_NODE_10091_length_167_cov_0.881356_g10058_i0 | PRJNA195897 | 10091 | 167 | 0.881356 | 1.47186452 | Lactococcus lactis | 1358 | Bacteria | Bacteria | 71.3 | 3.87e-8 | NTclustered | gi|552063405|gb|CP006766.1| | 1399116 | g10058 | i0 | 100 | 3.67664670658683 | 38 | 0 | 23 | 0 | 126 | 163 | 1344866 | 1344829 | Lactococcus lactis subsp. lactis KLDS 4.0325 chromosome, complete genome | blastn | 614 | 71.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Lactococcus lactis | ||
| 13119735 | 13119735 | PRJNA195897_P_NODE_12031_length_163_cov_0.912281_g11998_i0 | PRJNA195897 | 12031 | 163 | 0.912281 | 1.48701803 | Peptoniphilus genitalis | 3036303 | Bacteria | Bacteria | 235 | 1.26e-57 | NTclustered | gi|2246887130|gb|CP097885.1| | 3036303 | g11998 | i0 | 92.638 | 222.300613496933 | 163 | 12 | 100 | 0 | 1 | 163 | 291792 | 291954 | Peptoniphilus genitalis strain SAHP1 chromosome, complete genome | blastn | 36235 | 235 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Peptoniphilus | Peptoniphilus genitalis | ||
| 13808703 | 13808703 | PRJNA195897_P_NODE_10291_length_166_cov_1.333333_g10258_i0 | PRJNA195897 | 10291 | 166 | 1.333333 | 2.21333278 | root | 1 | Root_unresolved | Root_unresolved | 54.7 | 0.004 | NTclustered | gi|2579552595|gb|CP134494.1| | 129985 | g10258 | i0 | 100 | 0.385542168674699 | 29 | 0 | 17 | 0 | 92 | 120 | 987199 | 987171 | Mesobacillus jeotgali strain PS1 chromosome, complete genome | blastn | 64 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Mesobacillus | Mesobacillus jeotgali | ||
| 13808704 | 13808704 | PRJNA195897_P_NODE_1451_length_439_cov_2.010256_g1418_i0 | PRJNA195897 | 1451 | 439 | 2.010256 | 8.82502384 | Bacillus | 1386 | Bacteria | Bacteria | 795 | 0 | NTclustered | gi|984728683|gb|CP014179.1| | 1392 | g1418 | i0 | 99.317 | 1254.83371298405 | 439 | 3 | 100 | 0 | 1 | 439 | 12758 | 13196 | Bacillus anthracis strain Stendal chromosome, complete genome | blastn | 550872 | 795 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus anthracis | ||
| 14395081 | 14395081 | PRJNA195897_P_NODE_5792_length_203_cov_0.831169_g5759_i0 | PRJNA195897 | 5792 | 203 | 0.831169 | 1.68727307 | Lactococcus lactis | 1358 | Bacteria | Bacteria | 73.1 | 1.36e-8 | NTclustered | gi|552063405|gb|CP006766.1| | 1399116 | g5759 | i0 | 95.652 | 3.16256157635468 | 46 | 0 | 22 | 2 | 7 | 50 | 1344819 | 1344864 | Lactococcus lactis subsp. lactis KLDS 4.0325 chromosome, complete genome | blastn | 642 | 73.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Lactococcus lactis | ||
| 15668779 | 15668779 | PRJNA195897_P_NODE_3293_length_269_cov_3.481818_g3260_i0 | PRJNA195897 | 3293 | 269 | 3.481818 | 9.36609042 | Streptococcus mitis | 28037 | Bacteria | Bacteria | 497 | 2.63e-136 | NTclustered | gi|2886510793|emb|OZ217345.1| | 28037 | g3260 | i0 | 100 | 339 | 269 | 0 | 100 | 0 | 1 | 269 | 19802 | 19534 | Streptococcus mitis isolate S. mitis F22 genome assembly, chromosome: 1 | blastn | 91191 | 497 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 16357703 | 16357703 | PRJNA195897_P_NODE_10733_length_165_cov_2.241379_g10700_i0 | PRJNA195897 | 10733 | 165 | 2.241379 | 3.69827535 | Streptococcus | 1301 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|1403375826|emb|LS483375.1| | 1302 | g10700 | i0 | 100 | 336 | 165 | 0 | 100 | 0 | 1 | 165 | 625483 | 625319 | Streptococcus gordonii strain NCTC3165 genome assembly, chromosome: 1 | blastn | 55440 | 305 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus gordonii | ||
| 16943213 | 16943213 | PRJNA195897_P_NODE_10494_length_166_cov_0.888889_g10461_i0 | PRJNA195897 | 10494 | 166 | 0.888889 | 1.47555574 | Streptococcus mitis | 28037 | Bacteria | Bacteria | 263 | 5.9e-66 | NTclustered | gi|1957483218|gb|CP067992.1| | 28037 | g10461 | i0 | 95.181 | 98.8072289156626 | 166 | 8 | 100 | 0 | 1 | 166 | 737598 | 737433 | Streptococcus mitis strain S022-V7-A3 chromosome, complete genome | blastn | 16402 | 263 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 18906747 | 18906747 | PRJNA195897_P_NODE_6875_length_189_cov_1.485714_g6842_i0 | PRJNA195897 | 6875 | 189 | 1.485714 | 2.80799946 | Anaerococcus | 165779 | Bacteria | Bacteria | 350 | 5.14e-92 | NTclustered | gi|1374529452|ref|NR_076129.2| | 33034 | g6842 | i0 | 100 | 38.2857142857143 | 189 | 0 | 100 | 0 | 1 | 189 | 436 | 248 | Anaerococcus prevotii strain DSM 20548 23S ribosomal RNA, complete sequence | blastn | 7236 | 350 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus prevotii | ||
| 20181343 | 20181343 | PRJNA195897_P_NODE_10476_length_166_cov_0.888889_g10443_i0 | PRJNA195897 | 10476 | 166 | 0.888889 | 1.47555574 | Lactiplantibacillus | 2767842 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|2739945079|emb|OZ061611.1| | 1590 | g10443 | i0 | 100 | 100.006024096386 | 166 | 0 | 100 | 0 | 1 | 166 | 1446246 | 1446411 | Lactiplantibacillus plantarum isolate Lactiplantibacillus plantarum CIRM-BIA2453 genome assembly, chromosome: 1 | blastn | 16601 | 307 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Lactiplantibacillus plantarum | ||
| 20181356 | 20181356 | PRJNA195897_P_NODE_4616_length_223_cov_1.385057_g4583_i0 | PRJNA195897 | 4616 | 223 | 1.385057 | 3.08867711 | root | 1 | Root_unresolved | Root_unresolved | 412 | 7.88e-111 | NTclustered | gi|289541377|gb|GU395995.1| | 29394 | g4583 | i0 | 100 | 103 | 223 | 0 | 100 | 0 | 1 | 223 | 749 | 527 | Dolosigranulum pigrum strain 33929-06 16S ribosomal RNA gene, partial sequence | blastn | 22969 | 412 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Dolosigranulum | Dolosigranulum pigrum | ||
| 20767487 | 20767487 | PRJNA195897_P_NODE_1477_length_434_cov_1.353247_g1444_i0 | PRJNA195897 | 1477 | 434 | 1.353247 | 5.87309198 | Ezakiella coagulans | 46507 | Bacteria | Bacteria | 686 | 0 | NTclustered | gi|2238283248|gb|CP096650.1| | 46507 | g1444 | i0 | 95.392 | 444.827188940092 | 434 | 15 | 100 | 5 | 1 | 431 | 159781 | 160212 | Ezakiella coagulans strain C0061C1 chromosome, complete genome | blastn | 193055 | 686 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Ezakiella | Ezakiella coagulans | ||||
| 20767513 | 20767513 | PRJNA195897_P_NODE_3477_length_260_cov_1.156398_g3444_i0 | PRJNA195897 | 3477 | 260 | 1.156398 | 3.0066348 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 414 | 2.62e-111 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g3444 | i0 | 95.385 | 431.811538461538 | 260 | 12 | 100 | 0 | 1 | 260 | 2411 | 2152 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 112271 | 414 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 20767535 | 20767535 | PRJNA195897_P_NODE_6437_length_194_cov_1.434483_g6404_i0 | PRJNA195897 | 6437 | 194 | 1.434483 | 2.78289702 | Ezakiella coagulans | 46507 | Bacteria | Bacteria | 265 | 1.98e-66 | NTclustered | gi|2238283248|gb|CP096650.1| | 46507 | g6404 | i0 | 96.835 | 394.448453608247 | 158 | 5 | 81 | 0 | 37 | 194 | 159113 | 159270 | Ezakiella coagulans strain C0061C1 chromosome, complete genome | blastn | 76523 | 265 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Ezakiella | Ezakiella coagulans | ||||
| 22042572 | 22042572 | PRJNA195897_P_NODE_1138_length_498_cov_10.795100_g1107_i0 | PRJNA195897 | 1138 | 498 | 10.7951 | 53.759598 | Clostridium perfringens | 1502 | Bacteria | Bacteria | 52.8 | 0.049 | NTclustered | gi|2029167656|gb|CP073070.1| | 1502 | g1107 | i0 | 100 | 0.168674698795181 | 28 | 0 | 6 | 0 | 384 | 411 | 1708194 | 1708167 | Clostridium perfringens strain 19TSBNCP chromosome, complete genome | blastn | 84 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium perfringens | ||
| 24007272 | 24007272 | PRJNA195897_P_NODE_1739_length_392_cov_1.638484_g1706_i0 | PRJNA195897 | 1739 | 392 | 1.638484 | 6.42285728 | Bacillus | 1386 | Bacteria | Bacteria | 638 | 2.2599999999999997e-178 | NTclustered | gi|2798377728|gb|CP168764.1| | 1392 | g1706 | i0 | 96.154 | 1344.14030612245 | 390 | 15 | 99 | 0 | 1 | 390 | 29620 | 29231 | Bacillus anthracis strain Z03-J001 chromosome, complete genome | blastn | 526903 | 643 | 0.992223950233281 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus anthracis | ||
| 24007276 | 24007276 | PRJNA195897_P_NODE_4079_length_237_cov_1.382979_g4046_i0 | PRJNA195897 | 4079 | 237 | 1.382979 | 3.27766023 | Bacillus | 1386 | Bacteria | Bacteria | 322 | 1.47e-83 | NTclustered | gi|984728683|gb|CP014179.1| | 1392 | g4046 | i0 | 99.435 | 871.915611814346 | 177 | 1 | 75 | 0 | 61 | 237 | 13537 | 13361 | Bacillus anthracis strain Stendal chromosome, complete genome | blastn | 206644 | 322 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus anthracis | ||
| 24592177 | 24592177 | PRJNA195897_P_NODE_10440_length_166_cov_0.888889_g10407_i0 | PRJNA195897 | 10440 | 166 | 0.888889 | 1.47555574 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 63.9 | 6.42e-6 | NTclustered | gi|2189452932|gb|CP091718.1| | 2485925 | g10407 | i0 | 95.122 | 0.5 | 41 | 1 | 25 | 1 | 68 | 108 | 1587903 | 1587864 | MAG: Oscillospiraceae bacterium isolate nC33_bin.8.fa chromosome | blastn | 83 | 63.9 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 25281374 | 25281374 | PRJNA195897_P_NODE_1840_length_380_cov_2.978852_g1807_i0 | PRJNA195897 | 1840 | 380 | 2.978852 | 11.3196376 | root | 1 | Root_unresolved | Root_unresolved | 680 | 0 | NTclustered | gi|529813127|gb|KF306379.1| | 1292 | g1807 | i0 | 98.947 | 119 | 380 | 4 | 100 | 0 | 1 | 380 | 1482 | 1103 | Staphylococcus warneri strain y357 16S ribosomal RNA gene, partial sequence | blastn | 45220 | 686 | 0.991253644314869 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;