RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA195897" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA195897 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14395039 14395039 PRJNA195897_P_NODE_12252_length_162_cov_1.840708_g12219_i0 PRJNA195897 12252 162 1.840708 2.98194696 Babesia caballi 5871 SAR_Eukaryotes SAR_Eukaryotes 130 6.05e-26   NTclustered gi|2794945628|ref|XM_067860250.1| 5871 g12219 i0 82.237 1.75308641975309 152 25 93 2 12 162 306 156 Babesia caballi 40S ribosomal protein S11, putative (BcabD6B2_37170), partial mRNA blastn 284 130 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi
22042633 22042633 PRJNA195897_P_NODE_6238_length_197_cov_1.047297_g6205_i0 PRJNA195897 6238 197 1.047297 2.06317509 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.017   NTclustered gi|916417579|ref|XM_013374567.1| 5802 g6205 i0 100 0.142131979695431 28 0 14 0 53 80 618 591 Eimeria tenella uncharacterized protein (ETH_00042225), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;