RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA195897" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA195897 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1640753 1640753 PRJNA195897_P_NODE_2_length_8153_cov_6.682379_g1_i0 PRJNA195897 2 8153 6.682379 544.81435987 Perth bee virus 4 2201298 Viruses Viruses 2713 0   NTclustered gi|1390040502|gb|MG995733.1| 2201298 g1 i0 76.558 1.16190359376916 5072 1118 62 64 3118 8153 1981 7017 Perth bee virus 4 isolate WA2-63 nonstructural polyprotein gene, partial cds; and structural polyprotein gene, complete cds blastn 9473 2713 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Perth bee virus 4
15668778 15668778 PRJNA195897_P_NODE_3173_length_275_cov_1.610619_g3140_i0 PRJNA195897 3173 275 1.610619 4.42920225 Guapo partitivirus 3078405 Viruses Viruses 206 1.83e-48   NTclustered gi|2583640776|gb|OQ968299.1| 3078405 g3140 i0 83.333 10.2436363636364 222 37 81 0 26 247 740 519 MAG: Guapo partitivirus isolate JARP31 genomic sequence blastn 2817 206 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Guapo partitivirus
19491995 19491995 PRJNA195897_P_NODE_496_length_760_cov_6.291139_g468_i0 PRJNA195897 496 760 6.291139 47.8126564 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 632 2.1399999999999996e-176   NTclustered gi|2754691651|gb|PP872615.1| 3003959 g468 i0 82.072 0.990789473684211 753 124 99 10 11 759 8526 9271 MAG: Picornavirales sp. isolate TC-PLV-59 MR233-17E/322 genomic sequence blastn 753 632 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;