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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA195897" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 7 ✖

bioproject 1

  • PRJNA195897 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
366009 366009 PRJNA195897_P_NODE_61_length_1673_cov_2.951355_g55_i0 PRJNA195897 61 1673 2.951355 49.37616915 Amastigomonas marina 234594 Root_unresolved Root_unresolved 1110 0   NTclustered gi|31982973|gb|AY236711.1| 234594 g55 i0 80.414 93.1087866108787 1496 262 88 21 159 1628 1 1491 Amastigomonas marina heat shock protein 90 (Hsp90) gene, partial cds blastn 155771 1110 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Amastigomonas Amastigomonas marina
2916607 2916607 PRJNA195897_P_NODE_10623_length_166_cov_0.888889_g10590_i0 PRJNA195897 10623 166 0.888889 1.47555574 Thecamonas trahens 529818 Root_unresolved Root_unresolved 119 1.35e-22   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g10590 i0 88.66 0.94578313253012 97 11 58 0 70 166 163 259 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 157 119 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
10570051 10570051 PRJNA195897_P_NODE_2969_length_285_cov_1.809322_g2936_i0 PRJNA195897 2969 285 1.809322 5.1565677 Thecamonas trahens 529818 Root_unresolved Root_unresolved 113 1.19e-20   NTclustered gi|923122061|ref|XM_013899047.1| 461836 g2936 i0 91.463 0.396491228070175 82 7 29 0 123 204 713 632 Thecamonas trahens ATCC 50062 40S ribosomal protein S1 (AMSG_08716), mRNA blastn 113 113 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
15668786 15668786 PRJNA195897_P_NODE_413_length_831_cov_1.874680_g386_i0 PRJNA195897 413 831 1.87468 15.5785908 Thecamonas trahens 529818 Root_unresolved Root_unresolved 331 9.59e-86   NTclustered gi|923133140|ref|XM_013904582.1| 461836 g386 i0 78.745 32.4199759326113 494 105 59 0 214 707 494 1 Thecamonas trahens ATCC 50062 Ras-like protein rasG (AMSG_03185), partial mRNA blastn 26941 331 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16943274 16943274 PRJNA195897_P_NODE_4614_length_223_cov_1.431034_g4581_i0 PRJNA195897 4614 223 1.431034 3.19120582 Thecamonas trahens 529818 Root_unresolved Root_unresolved 132 2.47e-26   NTclustered gi|923129077|ref|XM_013902551.1| 461836 g4581 i0 78.713 4.62331838565022 202 39 90 4 1 200 554 753 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_05289), mRNA blastn 1031 132 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
20767470 20767470 PRJNA195897_P_NODE_1057_length_519_cov_5.782979_g1026_i0 PRJNA195897 1057 519 5.782979 30.01366101 Thecamonas trahens 529818 Root_unresolved Root_unresolved 224 1.02e-53   NTclustered gi|923125359|ref|XM_013900694.1| 461836 g1026 i0 82.879 12.8381502890173 257 36 49 6 68 320 529 277 Thecamonas trahens ATCC 50062 calmodulin (AMSG_07687), mRNA blastn 6663 224 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
24592203 24592203 PRJNA195897_P_NODE_200_length_1112_cov_6.610536_g184_i0 PRJNA195897 200 1112 6.610536 73.50916032 Thecamonas trahens 529818 Root_unresolved Root_unresolved 409 5.829999999999999e-109   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g184 i0 76.549 17.6915467625899 823 147 72 33 204 1003 997 198 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 19673 409 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;