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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA193544" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA193544 · 13 ✖

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2916534 2916534 PRJNA193544_S_NODE_1403_length_218_cov_20382.460317_g1388_i0 PRJNA193544 1403 218 20382.460317 44433.76349106 Spizellomyces punctatus 109760 Fungi Fungi 259 1.06e-64   NTclustered gi|1027029543|ref|XR_001677161.1| 645134 g1388 i0 93.22 67.697247706422 177 11 81 1 1 176 3897 4073 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11002), rRNA blastn 14758 259 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
4192970 4192970 PRJNA193544_S_NODE_1664_length_205_cov_26.403409_g1649_i0 PRJNA193544 1664 205 26.403409 54.12698845 Quaeritorhiza haematococci 2654861 Fungi Fungi 259 9.83e-65   NTclustered gi|1866582718|gb|MT730893.1| 2654861 g1649 i0 90.769 95.1756097560976 195 17 95 1 11 205 4334 4141 Quaeritorhiza haematococci isolate JEL0916 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19511 259 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes   Quaeritorhizaceae Quaeritorhiza Quaeritorhiza haematococci
10569938 10569938 PRJNA193544_S_NODE_1009_length_249_cov_17424.809091_g994_i0 PRJNA193544 1009 249 17424.809091 43387.77463659 uncultured Cladochytriales 2020364 Fungi Fungi 377 3.27e-100   NTclustered gi|2465121749|gb|OQ687150.1| 2020364 g994 i0 98.148 86.7590361445783 216 4 87 0 1 216 953 1168 Uncultured Cladochytriales isolate UMPB-1129 small subunit ribosomal RNA gene, partial sequence blastn 21603 377 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales     uncultured Cladochytriales
13119648 13119648 PRJNA193544_S_NODE_1331_length_223_cov_4.675258_g1316_i0 PRJNA193544 1331 223 4.675258 10.42582534 uncultured Chytridiomycota 175247 Fungi Fungi 63.9 9.15e-6   NTclustered gi|1016883648|gb|KU898762.1| 175247 g1316 i0 87.273 20.2152466367713 55 7 25 0 169 223 402 348 Uncultured Chytridiomycota clone Billefjorden9_BTH 28S ribosomal RNA gene, partial sequence blastn 4508 63.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota         uncultured Chytridiomycota
13808634 13808634 PRJNA193544_S_NODE_1171_length_236_cov_240.811594_g1156_i0 PRJNA193544 1171 236 240.811594 568.31536184 Eukaryota 2759 Fungi Fungi 202 1.9899999999999995e-47   NTclustered gi|665900107|dbj|AB971027.1| 282511 g1156 i0 92.806 59.478813559322 139 10 59 0 56 194 649 511 Uncultured Chytridiales gene for 18S ribosomal RNA, partial sequence, clone: Jp13Ch03E blastn 14037 202 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales     uncultured Chytridiales
13808664 13808664 PRJNA193544_S_NODE_311_length_357_cov_171.262195_g296_i0 PRJNA193544 311 357 171.262195 611.40603615 Chytridiomycetes 451435 Fungi Fungi 156 2.4999999999999998e-33   NTclustered gi|386165083|gb|HQ901703.1| 1134064 g296 i0 89.516 30.4901960784314 124 12 35 1 130 253 125 3 Neokarlingia chitinophila voucher JEL510 28S large subunit ribosomal RNA gene, partial sequence blastn 10885 156 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Neokarlingia Neokarlingia chitinophila
18906702 18906702 PRJNA193544_S_NODE_475_length_320_cov_183.209622_g460_i0 PRJNA193544 475 320 183.209622 586.2707904 Chytridiomycota 4761 Fungi Fungi 250 9.92e-62   NTclustered gi|55859492|emb|AJ864475.1| 301046 g460 i0 88.942 52.878125 208 16 64 7 1 204 4593 4797 Orpinomyces sp. OUS1 partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial 28S rRNA, clone V5-1 blastn 16921 250 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Orpinomyces Orpinomyces sp. OUS1
19491895 19491895 PRJNA193544_S_NODE_2876_length_163_cov_6.276119_g2861_i0 PRJNA193544 2876 163 6.276119 10.23007397 Chytriomycetaceae sp. 2012318 Fungi Fungi 169 1.29e-37   NTclustered gi|2468791093|gb|OQ702941.1| 2012318 g2861 i0 90.076 80.4294478527607 131 11 80 2 1 131 2855 2983 Chytriomycetaceae sp. isolate PSC289A small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13110 169 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae   Chytriomycetaceae sp.
20767404 20767404 PRJNA193544_S_NODE_1677_length_204_cov_20143.257143_g1662_i0 PRJNA193544 1677 204 20143.257143 41092.24457172 Polychytrium aggregatum 110093 Fungi Fungi 95.3 2.92e-15   NTclustered gi|311235598|ref|NG_027613.1| 110093 g1662 i0 95.082 29.2696078431373 61 1 30 1 111 171 1457 1515 Polychytrium aggregatum JEL 109 28S rRNA gene, partial sequence; from reference material blastn 5971 95.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
22042508 22042508 PRJNA193544_S_NODE_178_length_413_cov_9150.914062_g163_i0 PRJNA193544 178 413 9150.914062 37793.27507606 Spizellomyces punctatus 109760 Fungi Fungi 207 8.01e-49   NTclustered gi|1027029543|ref|XR_001677161.1| 645134 g163 i0 95.385 33.7578692493947 130 6 31 0 1 130 3897 4026 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11002), rRNA blastn 13942 207 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
23317994 23317994 PRJNA193544_S_NODE_1859_length_197_cov_20855.029762_g1844_i0 PRJNA193544 1859 197 20855.029762 41084.40863114 Powellomyces hirtus 109895 Fungi Fungi 195 2.6799999999999997e-45   NTclustered gi|2174920950|emb|LR997705.1| 109895 g1844 i0 88.095 85.2741116751269 168 14 84 4 1 165 17 181 Powellomyces hirtus partial 18S rRNA gene, isolate LW OTU4890_S4, clone M01452:264:000000000-D5YNG:1:1102:20648:9342 blastn 16799 195 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Powellomyces Powellomyces hirtus
24592127 24592127 PRJNA193544_S_NODE_1920_length_195_cov_3.566265_g1905_i0 PRJNA193544 1920 195 3.566265 6.95421675 Chytriomycetaceae sp. 2012318 Fungi Fungi 52.8 0.017   NTclustered gi|2468791082|gb|OQ702938.1| 2012318 g1905 i0 100 0.143589743589744 28 0 14 0 110 137 4562 4589 Chytriomycetaceae sp. isolate PSC286 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae   Chytriomycetaceae sp.
24592158 24592158 PRJNA193544_S_NODE_800_length_273_cov_6.274590_g785_i0 PRJNA193544 800 273 6.27459 17.1296307 Chytriomyces sp. WB 235A 388807 Fungi Fungi 174 5.13e-39   NTclustered gi|108744680|gb|DQ536493.1| 388807 g785 i0 79.044 24.6886446886447 272 43 97 12 1 266 1503 1766 Chytriomyces sp. WB235A isolate AFTOL-ID 1536 28S large subunit ribosomal RNA gene, partial sequence blastn 6740 174 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces sp. WB 235A

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;