RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA193544" and tax_clade = "Candidatus Thermofonsia Clade 3"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Thermofonsia Clade 3 · 7 ✖

bioproject 1

  • PRJNA193544 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1640640 1640640 PRJNA193544_S_NODE_102_length_471_cov_12.205882_g89_i0 PRJNA193544 102 471 12.205882 57.48970422 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 422 3.03e-113   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g89 i0 83.369 20.1698513800425 469 64 99 10 1 466 3495511 3495968 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 9500 422 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
11844478 11844478 PRJNA193544_S_NODE_610_length_299_cov_188.148148_g595_i0 PRJNA193544 610 299 188.148148 562.56296252 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 180 1.22e-40   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g595 i0 79.061 63.1772575250836 277 46 92 5 24 297 3494859 3494592 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 18890 180 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
13119644 13119644 PRJNA193544_S_NODE_1211_length_232_cov_19136.507389_g1196_i0 PRJNA193544 1211 232 19136.507389 44396.69714248 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 217 6.949999999999999e-52   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g1196 i0 86.207 93.926724137931 203 24 87 3 1 202 3497110 3497309 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 21791 217 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
16943187 16943187 PRJNA193544_S_NODE_694_length_287_cov_10.422481_g679_i0 PRJNA193544 694 287 10.422481 29.91252047 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 322 1.83e-83   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g679 i0 89.844 436.407665505226 256 19 87 6 6 256 3496032 3496285 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 125249 322 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
19491887 19491887 PRJNA193544_S_NODE_2376_length_178_cov_28.020134_g2361_i0 PRJNA193544 2376 178 28.020134 49.87583852 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 252 1.38e-62   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g2361 i0 96.689 273.02808988764 151 5 85 0 1 151 3497140 3496990 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 48599 252 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
23318014 23318014 PRJNA193544_S_NODE_319_length_354_cov_10909.276923_g304_i0 PRJNA193544 319 354 10909.276923 38618.84030742 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 355 2.28e-93   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g304 i0 87.188 29.8418079096045 320 32 90 5 35 354 3495821 3495511 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 10564 355 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
24592132 24592132 PRJNA193544_S_NODE_2160_length_185_cov_2.814103_g2145_i0 PRJNA193544 2160 185 2.814103 5.20609055 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 241 3.1400000000000008e-59   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g2145 i0 90.27 6.57837837837838 185 17 100 1 1 185 3495922 3495739 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 1217 241 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;