contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA193544" and tax_clade = "Amoebozoa"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 365846 | 365846 | PRJNA193544_S_NODE_1061_length_246_cov_7.460829_g1046_i0 | PRJNA193544 | 1061 | 246 | 7.460829 | 18.35363934 | Amoebozoa sp. SZA19 | 1089205 | Root_unresolved | Root_unresolved | 370 | 5.399999999999999e-98 | NTclustered | gi|441475832|emb|FN562422.4| | 1089205 | g1046 | i0 | 95.671 | 44.4471544715447 | 231 | 8 | 93 | 2 | 17 | 246 | 634 | 405 | Amoebozoa sp. SZA19 18S rRNA gene, isolate SZA19 | blastn | 10934 | 370 | 1 | Eukaryota | Amoebozoa | Amoebozoa sp. SZA19 | |||||||
| 365892 | 365892 | PRJNA193544_S_NODE_3141_length_157_cov_12.421875_g3126_i0 | PRJNA193544 | 3141 | 157 | 12.421875 | 19.50234375 | Vannella septentrionalis | 197531 | Discosea | other_Eukaryota | 274 | 2.54e-69 | NTclustered | gi|300078499|gb|GU001161.1| | 197531 | g3126 | i0 | 98.089 | 43.2165605095541 | 157 | 3 | 100 | 0 | 1 | 157 | 866 | 1022 | Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 6785 | 274 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Vannella | Vannella septentrionalis | |||
| 1640697 | 1640697 | PRJNA193544_S_NODE_722_length_283_cov_15.629921_g707_i0 | PRJNA193544 | 722 | 283 | 15.629921 | 44.23267643 | Tubulinea group 04 sp. CAL5 | 1215995 | Tubulinea | other_Eukaryota | 427 | 3.7099999999999998e-115 | NTclustered | gi|399764275|gb|JQ271786.1| | 1215995 | g707 | i0 | 93.993 | 13.6183745583039 | 283 | 15 | 100 | 2 | 1 | 283 | 458 | 178 | Tubulinea group 04 sp. CAL5 18S ribosomal RNA gene, partial sequence | blastn | 3854 | 427 | 1 | Eukaryota | Amoebozoa | Tubulinea | Tubulinea group 04 sp. CAL5 | ||||||
| 2916530 | 2916530 | PRJNA193544_S_NODE_1203_length_233_cov_3040.176471_g1188_i0 | PRJNA193544 | 1203 | 233 | 3040.176471 | 7083.61117743 | Vannella septentrionalis | 197531 | Discosea | other_Eukaryota | 305 | 1.45e-78 | NTclustered | gi|300078499|gb|GU001161.1| | 197531 | g1188 | i0 | 96.721 | 11.9828326180258 | 183 | 6 | 79 | 0 | 1 | 183 | 2961 | 3143 | Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 2792 | 305 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Vannella | Vannella septentrionalis | |||
| 3605715 | 3605715 | PRJNA193544_S_NODE_283_length_363_cov_1848.269461_g268_i0 | PRJNA193544 | 283 | 363 | 1848.269461 | 6709.21814343 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 521 | 2.18e-143 | NTclustered | gi|407369299|emb|FN562423.1| | 688087 | g268 | i0 | 96.519 | 82.4187327823691 | 316 | 9 | 87 | 2 | 50 | 363 | 584 | 269 | Amoebozoa sp. Pa24 partial 18S rRNA gene, isolate Pa24 | blastn | 29918 | 521 | 1 | Eukaryota | Amoebozoa | Amoebozoa sp. Pa24 | |||||||
| 9983296 | 9983296 | PRJNA193544_S_NODE_3448_length_151_cov_3.459016_g3433_i0 | PRJNA193544 | 3448 | 151 | 3.459016 | 5.22311416 | Vermamoeba | 1260114 | Tubulinea | other_Eukaryota | 185 | 1.1599999999999999e-42 | NTclustered | gi|909719645|gb|KT185625.1| | 5778 | g3433 | i0 | 99.029 | 66.4105960264901 | 103 | 1 | 68 | 0 | 11 | 113 | 4837 | 4735 | Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 10028 | 185 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 11258459 | 11258459 | PRJNA193544_S_NODE_2529_length_173_cov_310.576389_g2514_i0 | PRJNA193544 | 2529 | 173 | 310.576389 | 537.29715297 | Hartmannellidae | 5776 | Tubulinea | other_Eukaryota | 320 | 3.61e-83 | NTclustered | gi|11527309|gb|AF293902.1|AF293902 | 136464 | g2514 | i0 | 100 | 96.7919075144509 | 173 | 0 | 100 | 0 | 1 | 173 | 2 | 174 | Saccamoeba limax small subunit ribosomal RNA gene, complete sequence | blastn | 16745 | 320 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Saccamoeba | Saccamoeba limax | ||
| 14394970 | 14394970 | PRJNA193544_S_NODE_2032_length_190_cov_13.987578_g2017_i0 | PRJNA193544 | 2032 | 190 | 13.987578 | 26.5763982 | Mastigamoeba balamuthi | 108607 | Evosea | other_Eukaryota | 76.8 | 9.69e-10 | NTclustered | gi|19911164|dbj|AB066364.1| | 108607 | g2017 | i0 | 94 | 0.589473684210526 | 50 | 3 | 26 | 0 | 141 | 190 | 1710 | 1661 | Mastigamoeba balamuthi gene for LSU rRNA, partial sequence, clone:MbR2 | blastn | 112 | 76.8 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Mastigamoebidae | Mastigamoeba | Mastigamoeba balamuthi | |||
| 15668657 | 15668657 | PRJNA193544_S_NODE_1133_length_240_cov_8.085308_g1118_i0 | PRJNA193544 | 1133 | 240 | 8.085308 | 19.4047392 | uncultured Vannellidae | 544561 | Discosea | other_Eukaryota | 394 | 3.11e-105 | NTclustered | gi|270381377|emb|FN598227.1| | 544561 | g1118 | i0 | 97.414 | 89.3625 | 232 | 5 | 96 | 1 | 1 | 231 | 812 | 1043 | Uncultured Vannellidae partial 18S rRNA gene, clone BIO1_A11 | blastn | 21447 | 394 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | uncultured Vannellidae | ||||
| 16943189 | 16943189 | PRJNA193544_S_NODE_734_length_282_cov_16.367589_g719_i0 | PRJNA193544 | 734 | 282 | 16.367589 | 46.15660098 | Rhizamoeba saxonica | 200886 | Tubulinea | other_Eukaryota | 76.8 | 1.54e-9 | NTclustered | gi|300078497|gb|GU001159.1| | 200886 | g719 | i0 | 82.653 | 151.251773049645 | 98 | 6 | 33 | 9 | 190 | 281 | 2849 | 2941 | Rhizamoeba saxonica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 42653 | 76.8 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Leptomyxida | Flabellulidae | Rhizamoeba | Rhizamoeba saxonica | ||
| 18906687 | 18906687 | PRJNA193544_S_NODE_2035_length_190_cov_8.658385_g2020_i0 | PRJNA193544 | 2035 | 190 | 8.6583850000000009 | 16.4509315 | Hartmannellidae | 5776 | Tubulinea | other_Eukaryota | 130 | 7.33e-26 | NTclustered | gi|11527309|gb|AF293902.1|AF293902 | 136464 | g2020 | i0 | 97.368 | 39.2421052631579 | 76 | 2 | 40 | 0 | 115 | 190 | 691 | 616 | Saccamoeba limax small subunit ribosomal RNA gene, complete sequence | blastn | 7456 | 130 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Saccamoeba | Saccamoeba limax | ||
| 22042490 | 22042490 | PRJNA193544_S_NODE_118_length_448_cov_8.818616_g105_i0 | PRJNA193544 | 118 | 448 | 8.818616 | 39.50739968 | uncultured Rhizamoeba | 1260765 | Tubulinea | other_Eukaryota | 459 | 2.1899999999999997e-124 | NTclustered | gi|511487963|gb|JX898537.1| | 1260765 | g105 | i0 | 86.279 | 36.4866071428571 | 430 | 50 | 95 | 9 | 1 | 426 | 131 | 555 | Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence | blastn | 16346 | 459 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Leptomyxida | Flabellulidae | uncultured Rhizamoeba | |||
| 22042491 | 22042491 | PRJNA193544_S_NODE_1218_length_232_cov_5.014778_g1203_i0 | PRJNA193544 | 1218 | 232 | 5.014778 | 11.63428496 | Tubulinea sp. 4388 | 1216001 | Tubulinea | other_Eukaryota | 339 | 1.42e-88 | NTclustered | gi|399764265|gb|JQ271776.1| | 1216001 | g1203 | i0 | 93.133 | 8.50862068965517 | 233 | 13 | 99 | 3 | 1 | 231 | 232 | 1 | Tubulinea sp. 4388 18S ribosomal RNA gene, partial sequence | blastn | 1974 | 339 | 1 | Eukaryota | Amoebozoa | Tubulinea | Tubulinea sp. 4388 | ||||||
| 22732018 | 22732018 | PRJNA193544_S_NODE_618_length_299_cov_5.077778_g603_i0 | PRJNA193544 | 618 | 299 | 5.077778 | 15.18255622 | Amoebidae | 35218 | Tubulinea | other_Eukaryota | 329 | 1.15e-85 | NTclustered | gi|17897589|emb|AJ314604.1| | 5775 | g603 | i0 | 87.5 | 76.4882943143813 | 288 | 32 | 95 | 4 | 2 | 285 | 1054 | 767 | Amoeba proteus partial 16S rRNA gene, strain Geneva | blastn | 22870 | 329 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 24007234 | 24007234 | PRJNA193544_S_NODE_799_length_273_cov_14.323770_g784_i0 | PRJNA193544 | 799 | 273 | 14.32377 | 39.1038921 | Hartmannellidae | 5776 | Tubulinea | other_Eukaryota | 337 | 6.18e-88 | NTclustered | gi|11527309|gb|AF293902.1|AF293902 | 136464 | g784 | i0 | 89.552 | 93.8534798534799 | 268 | 24 | 97 | 4 | 1 | 266 | 1228 | 963 | Saccamoeba limax small subunit ribosomal RNA gene, complete sequence | blastn | 25622 | 337 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Saccamoeba | Saccamoeba limax |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;