RNAquarium Metadata Server
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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA177642" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 13 ✖

tax_kingdom 1

bioproject 1

  • PRJNA177642 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2330419 2330419 PRJNA177642_P_NODE_3822_length_771_cov_2.105121_g2904_i0 PRJNA177642 3822 771 2.105121 16.23048291 Iflavirus 232799 Viruses Viruses 1380 0   NTclustered gi|2889516231|gb|PP437962.1| 198112 g2904 i0 98.962 100 771 8 100 0 1 771 8421 9191 Deformed wing virus isolate MK-MalinoSvetiNikole16_2017_P_G2 genotype DWV-A, complete genome blastn 77100 1380 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus aladeformis
2916057 2916057 PRJNA177642_P_NODE_11203_length_330_cov_2.295681_g9978_i0 PRJNA177642 11203 330 2.295681 7.5757473 Iflavirus aladeformis 3047792 Viruses Viruses 599 8.849999999999995e-167   NTclustered gi|2889516181|gb|PP437936.1| 198112 g9978 i0 99.394 99.9666666666667 330 2 100 0 1 330 4644 4973 Deformed wing virus isolate IT-Palermo4_2017_H142_G1 genotype DWV-A, complete genome blastn 32989 599 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus aladeformis
5468910 5468910 PRJNA177642_P_NODE_3645_length_795_cov_2.997389_g2747_i0 PRJNA177642 3645 795 2.997389 23.82924255 Iflavirus aladeformis 3047792 Viruses Viruses 861 0   NTclustered gi|1389533261|gb|MF623172.1| 198112 g2747 i0 99.576 97.5081761006289 472 2 98 0 324 795 9710 9239 Deformed wing virus isolate Hamilton polyprotein gene, complete cds blastn 77519 861 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus aladeformis
6157848 6157848 PRJNA177642_P_NODE_14645_length_205_cov_1.636364_g13420_i0 PRJNA177642 14645 205 1.636364 3.3545462 Iflavirus 232799 Viruses Viruses 379 7.229999999999999e-101   NTclustered gi|2889516223|gb|PP437958.1| 198112 g13420 i0 100 100 205 0 100 0 1 205 700 496 Deformed wing virus isolate MK-MalinoSvetiNikole15_2017_H47_G2 genotype DWV-A, complete genome blastn 20500 379 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus aladeformis
11844128 11844128 PRJNA177642_P_NODE_3110_length_869_cov_2.076190_g2289_i0 PRJNA177642 3110 869 2.07619 18.0420911 Iflavirus aladeformis 3047792 Viruses Viruses 1389 0   NTclustered gi|2889516231|gb|PP437962.1| 198112 g2289 i0 94.921 101.988492520138 886 28 100 1 1 869 1981 1096 Deformed wing virus isolate MK-MalinoSvetiNikole16_2017_P_G2 genotype DWV-A, complete genome blastn 88628 1389 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus aladeformis
16357507 16357507 PRJNA177642_P_NODE_12413_length_301_cov_2.687500_g11188_i0 PRJNA177642 12413 301 2.6875 8.089375 Iflavirus 232799 Viruses Viruses 545 1.0499999999999999e-150   NTclustered gi|1219413467|gb|KY909333.1| 198112 g11188 i0 99.336 100 301 2 100 0 1 301 5245 5545 Deformed wing virus isolate Vespa_crabro_DWV_PI_2016, complete genome blastn 30100 545 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus aladeformis
18906555 18906555 PRJNA177642_P_NODE_14635_length_205_cov_2.289773_g13410_i0 PRJNA177642 14635 205 2.289773 4.69403465 Iflavirus 232799 Viruses Viruses 368 1.57e-97   NTclustered gi|2163648268|gb|MT636322.1| 198112 g13410 i0 99.024 100 205 2 100 0 1 205 4071 3867 MAG: Deformed wing virus isolate DWV-MS-APR15, complete genome blastn 20500 368 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus aladeformis
20181151 20181151 PRJNA177642_P_NODE_14456_length_210_cov_2.176796_g13231_i0 PRJNA177642 14456 210 2.176796 4.5712716 Iflavirus 232799 Viruses Viruses 388 1.24e-103   NTclustered gi|2320173005|gb|ON648744.1| 198112 g13231 i0 100 100 210 0 100 0 1 210 7049 7258 MAG: Deformed wing virus isolate DWV LS26/2018, complete genome blastn 21000 388 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus aladeformis
22731860 22731860 PRJNA177642_P_NODE_1278_length_1319_cov_2.842636_g852_i0 PRJNA177642 1278 1319 2.842636 37.49436884 Iflavirus 232799 Viruses Viruses 2287 0   NTclustered gi|2889516239|gb|PP437966.1| 198112 g852 i0 97.953 100 1319 27 100 0 1 1319 6963 5645 Deformed wing virus isolate RO-TarguMures31_2017_H25_G1 genotype DWV-A, complete genome blastn 131900 2287 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus aladeformis
22731862 22731862 PRJNA177642_P_NODE_13578_length_243_cov_2.420561_g12353_i0 PRJNA177642 13578 243 2.420561 5.88196323 Iflavirus 232799 Viruses Viruses 444 3.09e-120   NTclustered gi|1535849293|gb|MH069506.1| 198112 g12353 i0 99.588 99.9958847736626 243 1 100 0 1 243 529 287 Deformed wing virus isolate DWV-USA-p119 polyprotein gene, complete cds blastn 24299 444 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus aladeformis
24591684 24591684 PRJNA177642_P_NODE_12980_length_285_cov_1.941406_g11755_i0 PRJNA177642 12980 285 1.941406 5.5330071 Iflavirus aladeformis 3047792 Viruses Viruses 516 7.77e-142   NTclustered gi|1802649223|gb|MN538208.1| 198112 g11755 i0 99.298 100 285 2 100 0 1 285 7471 7755 Deformed wing virus isolate DWV_A_New_Zealand, complete genome blastn 28500 516 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus aladeformis
25281166 25281166 PRJNA177642_P_NODE_13740_length_236_cov_2.768116_g12515_i0 PRJNA177642 13740 236 2.768116 6.53275376 Iflavirus 232799 Viruses Viruses 387 5.11e-103   NTclustered gi|459283906|gb|KC249928.1| 198112 g12515 i0 99.07 99.3093220338983 215 2 100 0 1 215 48 262 Deformed wing virus isolate G_DD_3F polyprotein gene, partial cds blastn 23437 387 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus aladeformis
25281230 25281230 PRJNA177642_P_NODE_5240_length_625_cov_3.166107_g4182_i0 PRJNA177642 5240 625 3.166107 19.78816875 Iflavirus 232799 Viruses Viruses 1120 0   NTclustered gi|71480055|ref|NC_004830.2| 198112 g4182 i0 98.88 99.9936 625 7 100 0 1 625 8415 7791 Deformed wing virus, complete genome blastn 62496 1120 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus aladeformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;