RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA177642" and tax_phylum = "Peploviricota"

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tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA177642 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11258395 11258395 PRJNA177642_P_NODE_8909_length_393_cov_22.258242_g7694_i0 PRJNA177642 8909 393 22.258242 87.47489106 root 1 Root_unresolved Root_unresolved 108 7.91e-19   NTclustered gi|671698184|gb|KM192300.1| 10359 g7694 i0 98.361 31.4351145038168 61 1 30 0 69 129 39438 39498 Human herpesvirus 5 strain Merlin isolate RCMV1528, complete genome blastn 12354 108 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus humanbeta5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;