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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA177642" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA177642 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
365436 365436 PRJNA177642_P_NODE_15641_length_183_cov_2.012987_g14416_i0 PRJNA177642 15641 183 2.012987 3.68376621 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 267 5.109999999999999e-67   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g14416 i0 92.896 3 183 13 100 0 1 183 445 627 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 549 267 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
6157847 6157847 PRJNA177642_P_NODE_14225_length_218_cov_1.634921_g13000_i0 PRJNA177642 14225 218 1.634921 3.56412778 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 278 2.92e-70   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g13000 i0 98.113 3.64220183486239 159 3 73 0 1 159 2924 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 794 278 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
8707891 8707891 PRJNA177642_P_NODE_5527_length_604_cov_3.186087_g4450_i0 PRJNA177642 5527 604 3.186087 19.24396548 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 575 2.869999999999999e-159   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g4450 i0 97.067 54.8791390728477 341 10 98 0 264 604 2345 2005 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 33147 580 0.991379310344828 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
11844021 11844021 PRJNA177642_P_NODE_15410_length_188_cov_1.169811_g14185_i0 PRJNA177642 15410 188 1.169811 2.19924468 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 292 8.72e-75   NTclustered gi|347439295|gb|JN111996.1| 151077 g14185 i0 94.681 96.8351063829787 188 10 100 0 1 188 556 369 Chilodonella uncinata strain USA_SC2 alpha-tubulin (atub) gene, partial cds; macronuclear blastn 18205 292 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
16357511 16357511 PRJNA177642_P_NODE_13253_length_264_cov_4.123404_g12028_i0 PRJNA177642 13253 264 4.123404 10.88578656 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 477 3.359999999999999e-130   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g12028 i0 99.242 14.1931818181818 264 2 100 0 1 264 1775 1512 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 3747 477 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
18906585 18906585 PRJNA177642_P_NODE_18595_length_162_cov_1.082707_g17370_i0 PRJNA177642 18595 162 1.082707 1.75398534 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 300 4.36e-77   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g17370 i0 100 26.962962962963 162 0 100 0 1 162 1209 1370 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 4368 300 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
22042309 22042309 PRJNA177642_P_NODE_7558_length_459_cov_1.527907_g6371_i0 PRJNA177642 7558 459 1.527907 7.01309313 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 276 2.4299999999999997e-69   NTclustered gi|158347525|gb|EU047814.1| 151077 g6371 i0 93.085 36.7712418300654 188 13 41 0 271 458 97 284 Chilodonella uncinata clone Shared_P1 beta-tubulin gene, partial cds; macronuclear blastn 16878 276 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
24007062 24007062 PRJNA177642_P_NODE_10999_length_334_cov_2.219672_g9774_i0 PRJNA177642 10999 334 2.219672 7.41370448 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 213 1.36e-50   NTclustered gi|13194559|gb|AF300281.1|AF300281 151077 g9774 i0 99.16 55.7904191616766 119 0 68 1 1 118 1656 1538 Chilodonella uncinata clone 1 18S small subunit ribosomal RNA gene, partial sequence blastn 18634 213 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;