RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA169559" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA169559 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14394124 14394124 PRJNA169559_P_NODE_28532_length_273_cov_1.299180_g26456_i0 PRJNA169559 28532 273 1.29918 3.5467614 Nematostella vectensis 45351 Cnidaria other_Eukaryota 71.3 6.92e-8   NTclustered gi|2257845315|ref|XM_048720923.1| 45351 g26456 i0 97.561 9.9010989010989 41 1 15 0 174 214 112 72 PREDICTED: Nematostella vectensis histone H2A (LOC5497237), mRNA blastn 2703 71.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
23317025 23317025 PRJNA169559_P_NODE_20859_length_360_cov_7.102719_g18802_i0 PRJNA169559 20859 360 7.102719 25.5697884 Mastigias albipunctata 3143520 Cnidaria other_Eukaryota 128 5.51e-25   NTclustered gi|2862235117|gb|PQ647264.1| 3143520 g18802 i0 93.103 23.2194444444444 87 6 24 0 2 88 2959 3045 Mastigias albipunctata isolate AGC18067 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8359 128 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Mastigiidae Mastigias Mastigias albipunctata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;