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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA169559" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 12 ✖

bioproject 1

  • PRJNA169559 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1639798 1639798 PRJNA169559_P_NODE_27642_length_278_cov_4.646586_g25566_i0 PRJNA169559 27642 278 4.646586 12.91750908 Haematococcus lacustris 44745 Plants Plants 446 9.999999999999998e-121   NTclustered gi|1279575454|gb|MF683078.1| 44745 g25566 i0 97.683 307.863309352518 259 6 93 0 1 259 2820 3078 Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast blastn 85586 446 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
1639892 1639892 PRJNA169559_P_NODE_44822_length_217_cov_2.622340_g42745_i0 PRJNA169559 44822 217 2.62234 5.6904778 Chlamydomonas reinhardtii 3055 Plants Plants 62.1 3.18e-5   NTclustered gi|2082253574|ref|XM_043066114.1| 3055 g42745 i0 97.222 2.03225806451613 36 1 17 0 57 92 2714 2679 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g403400v5), mRNA blastn 441 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
2330085 2330085 PRJNA169559_P_NODE_22742_length_331_cov_74.844371_g20672_i0 PRJNA169559 22742 331 74.844371 247.73486801 Trebouxia 13786 Plants Plants 582 8.939999999999999e-162   NTclustered gi|1273623725|gb|KY033354.1| 285713 g20672 i0 98.485 99.4018126888217 330 5 99 0 1 330 6304 6633 Uncultured Trebouxia photobiont voucher Lendemer 46119 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 32902 582 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia uncultured Trebouxia photobiont
4192134 4192134 PRJNA169559_P_NODE_34204_length_249_cov_50.190909_g32127_i0 PRJNA169559 34204 249 50.190909 124.97536341 Haematococcus lacustris 44745 Plants Plants 416 6.939999999999999e-112   NTclustered gi|1279575454|gb|MF683078.1| 44745 g32127 i0 96.787 288.971887550201 249 8 100 0 1 249 2252 2500 Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast blastn 71954 416 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
4192190 4192190 PRJNA169559_P_NODE_44124_length_222_cov_2.362694_g42047_i0 PRJNA169559 44124 222 2.362694 5.24518068 Auxenochlorella protothecoides 3075 Plants Plants 141 4.09e-29   NTclustered gi|760445552|ref|XM_011401543.1| 3075 g42047 i0 84.892 18.2387387387387 139 21 63 0 4 142 1293 1155 Auxenochlorella protothecoides V-type proton ATPase catalytic subunit A isoform 1 partial mRNA blastn 4049 141 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
5468174 5468174 PRJNA169559_P_NODE_13405_length_458_cov_3.480186_g11502_i0 PRJNA169559 13405 458 3.480186 15.93925188 Volvox carteri 3067 Plants Plants 56.5 0.003   NTclustered gi|302849719|ref|XM_002956343.1| 3068 g11502 i0 100 0.37117903930131 30 0 7 0 316 345 666 637 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_97422), partial mRNA blastn 170 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
9292933 9292933 PRJNA169559_P_NODE_12128_length_483_cov_5.658590_g4111_i1 PRJNA169559 12128 483 5.65859 27.3309897 Haematococcus lacustris 44745 Plants Plants 673 0   NTclustered gi|1279575454|gb|MF683078.1| 44745 g4111 i1 96.333 117.728778467909 409 15 85 0 75 483 3311 3719 Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast blastn 56863 673 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
10569077 10569077 PRJNA169559_P_NODE_29569_length_267_cov_1.651261_g27493_i0 PRJNA169559 29569 267 1.651261 4.40886687 Chlamydomonas reinhardtii 3055 Plants Plants 132 3.05e-26   NTclustered gi|2082247365|ref|XM_043062922.1| 3055 g27493 i0 87.611 7.08614232209738 113 14 42 0 1 113 1137 1249 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g269950v5), mRNA blastn 1892 132 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
10569177 10569177 PRJNA169559_P_NODE_45969_length_201_cov_8.343023_g43892_i0 PRJNA169559 45969 201 8.343023 16.76947623 Haematococcus lacustris 44745 Plants Plants 350 5.539999999999999e-92   NTclustered gi|1279575454|gb|MF683078.1| 44745 g43892 i0 100 401.278606965174 189 0 94 0 1 189 4197 4009 Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast blastn 80657 350 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
15667754 15667754 PRJNA169559_P_NODE_19933_length_374_cov_11.330435_g17894_i0 PRJNA169559 19933 374 11.330435 42.3758269 Coccomyxa subellipsoidea 248742 Plants Plants 62.1 5.91e-5   NTclustered gi|545365919|ref|XM_005647835.1| 574566 g17894 i0 95 1.58021390374332 40 1 10 1 295 333 408 447 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 591 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
15668028 15668028 PRJNA169559_P_NODE_5493_length_724_cov_116.759712_g4111_i0 PRJNA169559 5493 724 116.759712 845.34031488 Haematococcus lacustris 44745 Plants Plants 669 0   NTclustered gi|1279575454|gb|MF683078.1| 44745 g4111 i0 97.215 269.270718232044 395 11 55 0 330 724 3325 3719 Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast blastn 194952 669 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
25280863 25280863 PRJNA169559_P_NODE_21540_length_350_cov_1.844237_g19477_i0 PRJNA169559 21540 350 1.844237 6.4548295 Eukaryota 2759 Plants Plants 52.8 0.033   NTclustered gi|2082262198|ref|XM_043068965.1| 3055 g19477 i0 100 0.248571428571429 28 0 8 0 44 71 1699 1672 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g550000v5), mRNA blastn 87 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;