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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA169559" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 18 ✖

bioproject 1

  • PRJNA169559 · 18 ✖

analysis 1

  • blastn · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
365115 365115 PRJNA169559_P_NODE_47321_length_180_cov_1.364238_g45244_i0 PRJNA169559 47321 180 1.364238 2.4556284 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 100 5.38e-17   NTclustered gi|470477574|ref|XM_004342324.1| 1257118 g45244 i0 82.051 0.65 117 21 65 0 4 120 142 26 Acanthamoeba castellanii str. Neff Gprotein-coupled receptor (GPCR) family protein (ACA1_012740), partial mRNA blastn 117 100 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1639823 1639823 PRJNA169559_P_NODE_31022_length_260_cov_2.549784_g28946_i0 PRJNA169559 31022 260 2.549784 6.6294384 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 60.2 1.42e-4   NTclustered gi|470394462|ref|XM_004334945.1| 1257118 g28946 i0 97.143 0.673076923076923 35 1 13 0 68 102 174 140 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_096510), partial mRNA blastn 175 60.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1639834 1639834 PRJNA169559_P_NODE_32442_length_255_cov_2.017699_g30366_i0 PRJNA169559 32442 255 2.017699 5.14513245 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 137 6.22e-28   NTclustered gi|470381496|ref|XM_004333736.1| 1257118 g30366 i0 81.395 17.2745098039216 172 28 67 4 86 255 1216 1385 Acanthamoeba castellanii str. Neff methylmalonatesemialdehyde dehydrogenase (acylating), putative (ACA1_362550), partial mRNA blastn 4405 137 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5468564 5468564 PRJNA169559_P_NODE_9725_length_544_cov_891.689320_g7994_i0 PRJNA169559 9725 544 891.68932 4850.7899008 Ripella decalvata 2047822 Discosea other_Eukaryota 752 0   NTclustered gi|1269228440|gb|MF683565.1| 2047822 g7994 i0 92.393 96.6213235294118 539 23 97 14 1 526 21 554 Ripella decalvata clone 15104 18S ribosomal RNA gene, partial sequence blastn 52562 752 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
6157596 6157596 PRJNA169559_P_NODE_6965_length_642_cov_20.097879_g5446_i0 PRJNA169559 6965 642 20.097879 129.02838318 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 824 0   NTclustered gi|399764264|gb|JQ271775.1| 1215986 g5446 i0 90.156 49.892523364486 640 54 99 8 3 639 1272 1905 Tubulinea group 02 sp. 1HFKJ 18S ribosomal RNA gene, partial sequence blastn 32031 824 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 02 sp. 1HFKJ
6742780 6742780 PRJNA169559_P_NODE_43746_length_224_cov_1.589744_g41669_i0 PRJNA169559 43746 224 1.589744 3.56102656 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 206 1.44e-48   NTclustered gi|470439766|ref|XM_004339180.1| 1257118 g41669 i0 84.112 12.5178571428571 214 32 95 2 2 214 1128 916 Acanthamoeba castellanii str. Neff Inositol3-phosphate synthase (ACA1_058810), partial mRNA blastn 2804 206 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8018395 8018395 PRJNA169559_P_NODE_34387_length_249_cov_1.936364_g32310_i0 PRJNA169559 34387 249 1.936364 4.82154636 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 165 2.77e-36   NTclustered gi|470421329|ref|XM_004337330.1| 1257118 g32310 i0 78.967 31.5983935742972 271 35 100 11 1 249 2033 1763 Acanthamoeba castellanii str. Neff Major Vault Protein repeatcontaining protein (ACA1_275390), partial mRNA blastn 7868 165 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9293063 9293063 PRJNA169559_P_NODE_2388_length_1068_cov_3.870067_g1508_i0 PRJNA169559 2388 1068 3.870067 41.33231556 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 678 0   NTclustered gi|470484553|ref|XM_004344028.1| 1257118 g1508 i0 80.649 66.811797752809 894 157 83 14 3 888 1347 462 Acanthamoeba castellanii str. Neff Sadenosyl-L-homocysteine hydrolase, putative (ACA1_054200), partial mRNA blastn 71355 678 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9293078 9293078 PRJNA169559_P_NODE_24868_length_304_cov_1.461818_g22792_i0 PRJNA169559 24868 304 1.461818 4.44392672 Dictyostelium purpureum 5786 Evosea other_Eukaryota 86.1 2.79e-12   NTclustered gi|330842002|ref|XM_003292928.1| 5786 g22792 i0 83.838 8.5296052631579 99 7 33 2 172 270 144 55 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_95723), partial mRNA blastn 2593 86.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
12533445 12533445 PRJNA169559_P_NODE_34550_length_248_cov_150.894977_g32473_i0 PRJNA169559 34550 248 150.894977 374.21954296 Vannella 95228 Discosea other_Eukaryota 409 1.16e-109   NTclustered gi|399764213|gb|JQ271724.1| 1215628 g32473 i0 96.371 92.7016129032258 248 9 100 0 1 248 138 385 Vannella sp. ACN1 18S ribosomal RNA gene, partial sequence blastn 22990 409 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ACN1
13808206 13808206 PRJNA169559_P_NODE_25831_length_293_cov_2.893939_g23755_i0 PRJNA169559 25831 293 2.893939 8.47924127 root 1 Root_unresolved Root_unresolved 145 4.36e-30   NTclustered gi|470484553|ref|XM_004344028.1| 1257118 g23755 i0 79.803 53.0477815699659 203 37 69 3 2 202 258 58 Acanthamoeba castellanii str. Neff Sadenosyl-L-homocysteine hydrolase, putative (ACA1_054200), partial mRNA blastn 15543 145 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14394261 14394261 PRJNA169559_P_NODE_472_length_2691_cov_9.120586_g177_i0 PRJNA169559 472 2691 9.120586 245.43496926 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 1698 0   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g177 i0 79.238 87.7896692679301 2495 474 92 35 126 2601 2520 51 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 236242 1698 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15668037 15668037 PRJNA169559_P_NODE_6013_length_692_cov_8.829563_g4587_i0 PRJNA169559 6013 692 8.829563 61.10057596 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 401 5.949999999999999e-107   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g4587 i0 78.896 67.8294797687861 616 112 88 15 14 620 1 607 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 46938 401 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15668063 15668063 PRJNA169559_P_NODE_8233_length_591_cov_831.177936_g6610_i0 PRJNA169559 8233 591 831.177936 4912.26160176 Ripella sp. 805 1217113 Discosea other_Eukaryota 881 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g6610 i0 95.035 95.8883248730965 564 22 95 6 12 573 1 560 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 56670 881 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
22041433 22041433 PRJNA169559_P_NODE_10198_length_530_cov_647.073852_g8444_i0 PRJNA169559 10198 530 647.073852 3429.4914156 Ripella sp. 805 1217113 Discosea other_Eukaryota 761 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g8444 i0 92.683 99.522641509434 533 31 99 6 2 530 1671 1143 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 52747 761 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
22041839 22041839 PRJNA169559_P_NODE_9858_length_540_cov_6.500978_g8122_i0 PRJNA169559 9858 540 6.500978 35.1052812 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 1.37e-57   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g8122 i0 80.795 55.2944444444444 302 58 56 0 99 400 422 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 29859 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23317319 23317319 PRJNA169559_P_NODE_7739_length_610_cov_346.624785_g6160_i0 PRJNA169559 7739 610 346.624785 2114.4111885 Tubulinea sp. 4388 1216001 Tubulinea other_Eukaryota 542 2.94e-149   NTclustered gi|399764265|gb|JQ271776.1| 1216001 g6160 i0 88.172 40.8508196721311 465 41 82 11 3 456 14 475 Tubulinea sp. 4388 18S ribosomal RNA gene, partial sequence blastn 24919 542 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea sp. 4388
24591136 24591136 PRJNA169559_P_NODE_1380_length_1396_cov_52.643014_g781_i0 PRJNA169559 1380 1396 52.643014 734.89647544 uncultured Rhizamoeba 1260765 Tubulinea other_Eukaryota 549 4.159999999999998e-151   NTclustered gi|511487963|gb|JX898537.1| 1260765 g781 i0 84.779 39.067335243553 565 67 40 17 78 632 1 556 Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence blastn 54538 549 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae   uncultured Rhizamoeba

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;