RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA168635" and tax_phylum = "Xenacoelomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Xenacoelomorpha · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA168635 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8017678 8017678 PRJNA168635_P_NODE_14667_length_210_cov_2.906832_g14251_i0 PRJNA168635 14667 210 2.906832 6.1043472 Nemertoderma westbladi 172109 Xenacoelomorpha other_Eukaryota 139 1.38e-28   NTclustered gi|157100013|emb|AM747482.1| 172109 g14251 i0 89.815 51.4809523809524 108 11 51 0 1 108 2081 1974 Nemertoderma westbladi partial 28S rRNA gene, isolate 1 blastn 10811 139 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Nemertodermatida Nemertodermatidae Nemertoderma Nemertoderma westbladi
8707154 8707154 PRJNA168635_P_NODE_8787_length_283_cov_5.529915_g8372_i0 PRJNA168635 8787 283 5.529915 15.64965945 Metazoa 33208 Xenacoelomorpha other_Eukaryota 71.3 7.21e-8   NTclustered gi|378781070|emb|FR837824.1| 996672 g8372 i0 83.784 16.8197879858657 74 12 26 0 204 277 1566 1639 Proporus bermudensis partial 28S rRNA gene, specimen voucher AWBer02 blastn 4760 71.3 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Proporidae Proporus Proporus bermudensis
18216382 18216382 PRJNA168635_P_NODE_35575_length_150_cov_4.940594_g35159_i0 PRJNA168635 35575 150 4.940594 7.410891 Symsagittifera roscoffensis 84072 Xenacoelomorpha other_Eukaryota 121 3.3e-23   NTclustered gi|2701322754|ref|XR_010164694.1| 84072 g35159 i0 91.011 30.58 89 8 59 0 38 126 111 23 PREDICTED: Symsagittifera roscoffensis large subunit ribosomal RNA (LOC134855907), rRNA blastn 4587 121 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;