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contig_metadata

35 rows where analysis = "blastn", bioproject = "PRJNA168635" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 35 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA168635 · 35 ✖

analysis 1

  • blastn · 35 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
364429 364429 PRJNA168635_P_NODE_23081_length_173_cov_42.483871_g22665_i0 PRJNA168635 23081 173 42.483871 73.49709683 Adineta vaga 104782 Rotifera other_Eukaryota 315 1.68e-81   NTclustered gi|259129963|gb|GQ398061.1| 104782 g22665 i0 99.422 85.3757225433526 173 1 100 0 1 173 5800 5972 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 14770 315 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
1639095 1639095 PRJNA168635_P_NODE_11982_length_236_cov_3.245989_g11566_i0 PRJNA168635 11982 236 3.245989 7.66053404 Mytilina mucronata 360681 Rotifera other_Eukaryota 320 5.26e-83   NTclustered gi|83285199|gb|DQ297746.1| 360681 g11566 i0 91.176 71.0762711864407 238 18 100 2 1 236 243 7 Mytilina mucronata 28S ribosomal RNA gene, partial sequence blastn 16774 320 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Mytilina Mytilina mucronata
2329665 2329665 PRJNA168635_P_NODE_6682_length_327_cov_307.316547_g6271_i0 PRJNA168635 6682 327 307.316547 1004.92510869 Metazoa 33208 Rotifera other_Eukaryota 586 6.82e-163   NTclustered gi|37785582|gb|AY210469.1| 96448 g6271 i0 99.688 53.7767584097859 321 0 98 1 3 323 1819 1500 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 17585 588 0.996598639455782 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
2915094 2915094 PRJNA168635_P_NODE_18963_length_186_cov_1.416058_g18547_i0 PRJNA168635 18963 186 1.416058 2.63386788 Philodina roseola 96448 Rotifera other_Eukaryota 222 1.15e-53   NTclustered gi|572455682|gb|KF159020.1| 96448 g18547 i0 88.172 2.56989247311828 186 22 100 0 1 186 437 622 Philodina roseola myosin heavy chain type II mRNA, partial cds blastn 478 222 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
2915378 2915378 PRJNA168635_P_NODE_5523_length_359_cov_54.829032_g5118_i0 PRJNA168635 5523 359 54.829032 196.83622488 Adineta vaga 104782 Rotifera other_Eukaryota 652 0   NTclustered gi|72153731|gb|DQ089739.1| 104782 g5118 i0 99.443 65.5487465181058 359 2 100 0 1 359 2443 2801 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 23532 652 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
4191637 4191637 PRJNA168635_P_NODE_26004_length_168_cov_1.638655_g25588_i0 PRJNA168635 26004 168 1.638655 2.7529404 Plationus patulus 360686 Rotifera other_Eukaryota 193 7.97e-45   NTclustered gi|308156996|gb|GQ890461.1| 904060 g25588 i0 87.5 72.7440476190476 168 20 99 1 1 167 179 12 Plationus patulus macracanthus isolate DNA11 large subunit ribosomal RNA gene, partial sequence blastn 12221 193 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Plationus Plationus patulus
6157055 6157055 PRJNA168635_P_NODE_32425_length_161_cov_38.723214_g32009_i0 PRJNA168635 32425 161 38.723214 62.34437454 Opisthokonta 33154 Rotifera other_Eukaryota 272 9.43e-69   NTclustered gi|164453107|gb|EU202670.1| 96446 g32009 i0 97.484 97.832298136646 159 4 99 0 2 160 447 289 Lecane bulla isolate Cattail Spring H internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 15751 274 0.992700729927007 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
6741975 6741975 PRJNA168635_P_NODE_10346_length_257_cov_1.278846_g9931_i0 PRJNA168635 10346 257 1.278846 3.28663422 Philodina citrina 468664 Rotifera other_Eukaryota 292 1.27e-74   NTclustered gi|407227484|emb|FR856884.1| 468664 g9931 i0 87.795 68.6459143968872 254 25 98 5 2 253 2134 1885 Philodina citrina complete mitochondrial genome blastn 17642 292 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
6742282 6742282 PRJNA168635_P_NODE_30426_length_163_cov_3.289474_g30010_i0 PRJNA168635 30426 163 3.289474 5.36184262 Keratella americana 885371 Rotifera other_Eukaryota 228 2.0999999999999998e-55   NTclustered gi|308156992|gb|GQ890457.1| 885371 g30010 i0 93.59 4.71165644171779 156 5 96 3 8 163 314 164 Keratella americana isolate DNA100 large subunit ribosomal RNA gene, partial sequence blastn 768 228 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Keratella Keratella americana
6742496 6742496 PRJNA168635_P_NODE_9866_length_264_cov_9.860465_g9451_i0 PRJNA168635 9866 264 9.860465 26.0316276 Lecane bulla 96446 Rotifera other_Eukaryota 436 5.7e-118   NTclustered gi|61200802|gb|AY829083.1| 96446 g9451 i0 96.591 95.7613636363636 264 8 100 1 1 264 1684 1422 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 25281 436 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
6742499 6742499 PRJNA168635_P_NODE_9986_length_262_cov_8.699531_g9571_i0 PRJNA168635 9986 262 8.699531 22.79277122 Epiphanes senta 338913 Rotifera other_Eukaryota 268 2.1799999999999998e-67   NTclustered gi|72153754|gb|DQ089742.1| 338913 g9571 i0 97.452 63.7213740458015 157 4 100 0 1 157 1148 1304 Epiphanes senta 28S ribosomal RNA gene, partial sequence blastn 16695 268 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Epiphanidae Epiphanes Epiphanes senta
8017817 8017817 PRJNA168635_P_NODE_22307_length_175_cov_4.150794_g21891_i0 PRJNA168635 22307 175 4.150794 7.2638895 Rotaria rotatoria 231624 Rotifera other_Eukaryota 259 8.09e-65   NTclustered gi|270267490|ref|NC_013568.1| 231624 g21891 i0 94.611 5.28 167 9 95 0 1 167 2212 2378 Rotaria rotatoria mitochondrion, complete genome blastn 924 259 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
9292357 9292357 PRJNA168635_P_NODE_11588_length_240_cov_8.047120_g11172_i0 PRJNA168635 11588 240 8.04712 19.313088 Lecane bulla 96446 Rotifera other_Eukaryota 339 1.48e-88   NTclustered gi|61200802|gb|AY829083.1| 96446 g11172 i0 92.083 41.2916666666667 240 19 100 0 1 240 2001 1762 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 9910 339 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
9292446 9292446 PRJNA168635_P_NODE_15788_length_201_cov_9.197368_g15372_i0 PRJNA168635 15788 201 9.197368 18.48670968 Encentrum astridae 360661 Rotifera other_Eukaryota 316 5.61e-82   NTclustered gi|124388846|gb|EF151006.1| 360661 g15372 i0 95.025 97.9950248756219 201 10 100 0 1 201 1734 1934 Encentrum astridae 28S ribosomal RNA gene, partial sequence blastn 19697 316 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Dicranophoridae Encentrum Encentrum astridae
9292763 9292763 PRJNA168635_P_NODE_4108_length_413_cov_8.879121_g3707_i0 PRJNA168635 4108 413 8.879121 36.67076973 Euchlanis alata 338269 Rotifera other_Eukaryota 693 0   NTclustered gi|83655555|gb|DQ079942.1| 338269 g3707 i0 97.08 71.9297820823245 411 12 99 0 1 411 249 659 Euchlanis alata 28S ribosomal RNA gene, partial sequence blastn 29707 693 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Euchlanis Euchlanis alata
9292767 9292767 PRJNA168635_P_NODE_4328_length_404_cov_129.247887_g3926_i0 PRJNA168635 4328 404 129.247887 522.16146348 Adineta vaga 104782 Rotifera other_Eukaryota 693 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g3926 i0 97.772 78.0940594059406 404 5 99 2 5 404 6638 7041 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 31550 693 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
11257406 11257406 PRJNA168635_P_NODE_1109_length_742_cov_144.873016_g828_i0 PRJNA168635 1109 742 144.873016 1074.95777872 Adineta 104781 Rotifera other_Eukaryota 1299 0   NTclustered gi|72153731|gb|DQ089739.1| 104782 g828 i0 98.248 48.7237196765499 742 13 100 0 1 742 1500 2241 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 36153 1304 0.996165644171779 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
13118544 13118544 PRJNA168635_P_NODE_7251_length_314_cov_4.475472_g6839_i0 PRJNA168635 7251 314 4.475472 14.05298208 Ascomorpha ovalis 360655 Rotifera other_Eukaryota 320 7.29e-83   NTclustered gi|83285183|gb|DQ297730.1| 360655 g6839 i0 85.231 47.0063694267516 325 33 100 12 1 314 840 520 Ascomorpha ovalis 28S ribosomal RNA gene, partial sequence blastn 14760 320 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Gastropidae Ascomorpha Ascomorpha ovalis
13807538 13807538 PRJNA168635_P_NODE_13171_length_223_cov_13.781609_g12755_i0 PRJNA168635 13171 223 13.781609 30.73298807 Lecane 96445 Rotifera other_Eukaryota 296 8.28e-76   NTclustered gi|61200802|gb|AY829083.1| 96446 g12755 i0 90.583 36.8654708520179 223 21 100 0 1 223 2006 1784 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 8221 296 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
14393512 14393512 PRJNA168635_P_NODE_17092_length_193_cov_3.694444_g16676_i0 PRJNA168635 17092 193 3.694444 7.13027692 Proales reinhardti 360697 Rotifera other_Eukaryota 268 1.5199999999999998e-67   NTclustered gi|83285207|gb|DQ297754.1| 360697 g16676 i0 91.71 18.6269430051813 193 16 100 0 1 193 534 726 Proales reinhardti 28S ribosomal RNA gene, partial sequence blastn 3595 268 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales reinhardti
16356648 16356648 PRJNA168635_P_NODE_21173_length_178_cov_10.348837_g20757_i0 PRJNA168635 21173 178 10.348837 18.42092986 Ploima 84394 Rotifera other_Eukaryota 183 5.12e-42   NTclustered gi|1845957847|gb|MT522671.1| 47121 g20757 i0 97.222 60.6573033707865 108 3 61 0 1 108 1614 1721 Notommata copeus isolate JH_005H10 small subunit ribosomal RNA gene, partial sequence blastn 10797 183 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Notommatidae Notommata Notommata copeus
16941514 16941514 PRJNA168635_P_NODE_12394_length_231_cov_3.483516_g11978_i0 PRJNA168635 12394 231 3.483516 8.04692196 Brachionus patulus 160652 Rotifera other_Eukaryota 350 6.54e-92   NTclustered gi|61200806|gb|AY829084.1| 160652 g11978 i0 93.939 94.9393939393939 231 14 100 0 1 231 1667 1437 Brachionus patulus 28S ribosomal RNA gene, partial sequence blastn 21931 350 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus patulus
17631918 17631918 PRJNA168635_P_NODE_274_length_1191_cov_55.417688_g186_i1 PRJNA168635 274 1191 55.417688 660.02466408 Opisthokonta 33154 Rotifera other_Eukaryota 1376 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g186 i1 94.519 67.3643996641478 894 45 75 4 301 1191 6946 7838 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 80231 1376 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
18216441 18216441 PRJNA168635_P_NODE_6175_length_340_cov_16.216495_g5765_i0 PRJNA168635 6175 340 16.216495 55.136083 Epiphanes senta 338913 Rotifera other_Eukaryota 496 1.23e-135   NTclustered gi|72153754|gb|DQ089742.1| 338913 g5765 i0 93.003 73.5823529411765 343 19 100 5 1 340 2139 1799 Epiphanes senta 28S ribosomal RNA gene, partial sequence blastn 25018 496 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Epiphanidae Epiphanes Epiphanes senta
18905578 18905578 PRJNA168635_P_NODE_12315_length_232_cov_3.426230_g11899_i0 PRJNA168635 12315 232 3.42623 7.9488536 Ploima 84394 Rotifera other_Eukaryota 289 1.45e-73   NTclustered gi|61200802|gb|AY829083.1| 96446 g11899 i0 89.167 37.4741379310345 240 14 98 4 3 230 1766 2005 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 8694 289 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
18905807 18905807 PRJNA168635_P_NODE_5855_length_349_cov_14.236667_g5448_i0 PRJNA168635 5855 349 14.236667 49.68596783 Asplanchna 84396 Rotifera other_Eukaryota 449 9.999999999999998e-122   NTclustered gi|61200811|gb|AY829085.1| 84397 g5448 i0 90.057 56.163323782235 352 28 100 7 1 349 2137 1790 Asplanchna sieboldi 28S ribosomal RNA gene, partial sequence blastn 19601 451 0.995565410199557 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sieboldii
20765898 20765898 PRJNA168635_P_NODE_14897_length_208_cov_3.603774_g14481_i0 PRJNA168635 14897 208 3.603774 7.49584992 Seison nebaliae 104778 Rotifera other_Eukaryota 60.2 1.09e-4   NTclustered gi|72153768|gb|DQ089744.1| 104778 g14481 i0 78 0.480769230769231 100 19 48 3 1 99 1921 1824 Seison nebaliae 28S ribosomal RNA gene, partial sequence blastn 100 60.2 1 Eukaryota Opisthokonta Metazoa Rotifera Pararotatoria Seisonacea Seisonidae Seison Seison nebaliae
20765971 20765971 PRJNA168635_P_NODE_18577_length_187_cov_2.398551_g18161_i0 PRJNA168635 18577 187 2.398551 4.48529037 Brachionus patulus 160652 Rotifera other_Eukaryota 224 3.21e-54   NTclustered gi|61200806|gb|AY829084.1| 160652 g18161 i0 88.649 1.97860962566845 185 19 99 2 3 187 1820 2002 Brachionus patulus 28S ribosomal RNA gene, partial sequence blastn 370 224 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus patulus
20766031 20766031 PRJNA168635_P_NODE_2257_length_541_cov_183.680894_g1880_i0 PRJNA168635 2257 541 183.680894 993.71363654 Adineta vaga 104782 Rotifera other_Eukaryota 719 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g1880 i0 98.063 4.36044362292052 413 8 94 0 3 415 9986 10398 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 2359 719 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
20766099 20766099 PRJNA168635_P_NODE_2717_length_502_cov_11.156733_g2328_i0 PRJNA168635 2717 502 11.156733 56.00679966 Keratella quadrata 204742 Rotifera other_Eukaryota 614 4.989999999999998e-171   NTclustered gi|83285188|gb|DQ297735.1| 204742 g2328 i0 88.802 73.9521912350598 509 46 99 7 1 501 963 458 Keratella quadrata 28S ribosomal RNA gene, partial sequence blastn 37124 614 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Keratella Keratella quadrata
20766189 20766189 PRJNA168635_P_NODE_33197_length_158_cov_43.155963_g32781_i0 PRJNA168635 33197 158 43.155963 68.18642154 Adineta editae 1740350 Rotifera other_Eukaryota 283 4.2499999999999995e-72   NTclustered gi|2292923484|gb|OP331323.1| 1740350 g32781 i0 98.75 101.139240506329 160 0 100 1 1 158 365 524 Adineta editae isolate AE1 small subunit ribosomal RNA gene, partial sequence blastn 15980 283 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta editae
22040982 22040982 PRJNA168635_P_NODE_15518_length_203_cov_5.759740_g15102_i0 PRJNA168635 15518 203 5.75974 11.6922722 Proales reinhardti 360697 Rotifera other_Eukaryota 287 4.46e-73   NTclustered gi|83285207|gb|DQ297754.1| 360697 g15102 i0 92.537 27.807881773399 201 13 98 1 1 199 201 1 Proales reinhardti 28S ribosomal RNA gene, partial sequence blastn 5645 287 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales reinhardti
22041324 22041324 PRJNA168635_P_NODE_5138_length_373_cov_4.422840_g4734_i0 PRJNA168635 5138 373 4.42284 16.4971932 Ascomorpha ovalis 360655 Rotifera other_Eukaryota 363 1.4399999999999999e-95   NTclustered gi|83285183|gb|DQ297730.1| 360655 g4734 i0 84.225 11.083109919571 374 57 100 2 1 373 717 345 Ascomorpha ovalis 28S ribosomal RNA gene, partial sequence blastn 4134 363 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Gastropidae Ascomorpha Ascomorpha ovalis
22731006 22731006 PRJNA168635_P_NODE_19978_length_182_cov_2.827068_g19562_i0 PRJNA168635 19978 182 2.827068 5.14526376 Flosculariaceae 2517309 Rotifera other_Eukaryota 270 3.93e-68   NTclustered gi|37785584|gb|AY210471.1| 104791 g19562 i0 93.407 73.4450549450549 182 12 100 0 1 182 97 278 Sinantherina socialis 28S ribosomal RNA gene, partial sequence blastn 13367 270 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Flosculariaceae Flosculariidae Sinantherina Sinantherina socialis
23316779 23316779 PRJNA168635_P_NODE_3559_length_442_cov_6.198473_g3159_i0 PRJNA168635 3559 442 6.198473 27.39725066 Euchlanis alata 338269 Rotifera other_Eukaryota 525 2.0999999999999996e-144   NTclustered gi|83655555|gb|DQ079942.1| 338269 g3159 i0 88.61 75.0090497737557 439 40 99 6 1 436 249 680 Euchlanis alata 28S ribosomal RNA gene, partial sequence blastn 33154 525 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Euchlanis Euchlanis alata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;