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contig_metadata

23 rows where analysis = "blastn", bioproject = "PRJNA168635" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 23 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA168635 · 23 ✖

analysis 1

  • blastn · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
364297 364297 PRJNA168635_P_NODE_15661_length_202_cov_5.431373_g15245_i0 PRJNA168635 15661 202 5.431373 10.97137346 Mucoromycotina sp. MIB 8842 1303160 Fungi Fungi 217 5.89e-52   NTclustered gi|459989458|gb|KC708422.1| 1303160 g15245 i0 86.765 100.782178217822 204 16 100 11 1 202 55 249 Mucoromycotina sp. MIB 8842 clone C 18S ribosomal RNA gene, partial sequence blastn 20358 217 1 Eukaryota Opisthokonta Fungi Mucoromycota Endogonomycetes Endogonales Densosporaceae   Mucoromycotina sp. MIB 8842
364453 364453 PRJNA168635_P_NODE_24801_length_169_cov_4.583333_g24385_i0 PRJNA168635 24801 169 4.583333 7.74583277 uncultured Entrophospora 1150877 Fungi Fungi 56.5 0.001   NTclustered gi|386364299|emb|HE775325.1| 1150877 g24385 i0 100 0.177514792899408 30 0 18 0 114 143 928 957 Uncultured Claroideoglomus 18S rRNA gene (partial), ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene (partial), tissue library 3/1-4/1-6/1, clone library KRU, clone 16 blastn 30 56.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Entrophosporales Entrophosporaceae   uncultured Entrophospora
1639436 1639436 PRJNA168635_P_NODE_33882_length_156_cov_4.149533_g33466_i0 PRJNA168635 33882 156 4.149533 6.47327148 Geosiphon pyriformis 50956 Fungi Fungi 126 7.46e-25   NTclustered gi|338221328|emb|AM268204.3| 50956 g33466 i0 86.957 1.48717948717949 115 12 72 3 3 115 2 115 Geosiphon pyriformis 5.8S rRNA gene, isolate Geo1, clone pFD112-2 blastn 232 126 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Archaeosporales Geosiphonaceae Geosiphon Geosiphon pyriformis
2329618 2329618 PRJNA168635_P_NODE_34042_length_156_cov_2.448598_g33626_i0 PRJNA168635 34042 156 2.448598 3.81981288 Mortierella 4855 Fungi Fungi 161 2.05e-35   NTclustered gi|411030762|gb|JX270228.1| 1253901 g33626 i0 90.4 66.7115384615385 125 9 78 3 35 156 109 233 Mortierella sp. 08CT03 28S-18S ribosomal RNA intergenic spacer, partial sequence blastn 10407 161 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella sp. 08CT03
3604695 3604695 PRJNA168635_P_NODE_24103_length_171_cov_2.131148_g23687_i0 PRJNA168635 24103 171 2.131148 3.64426308 Mucoromycota 1913637 Fungi Fungi 95.3 2.35e-15   NTclustered gi|1838369779|gb|MN970591.1| 64495 g23687 i0 100 45.2573099415205 51 0 30 0 1 51 724 674 Rhizopus arrhizus strain XY01865 28S-18S ribosomal RNA intergenic spacer and 18S ribosomal RNA gene, partial sequence blastn 7739 95.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
4191603 4191603 PRJNA168635_P_NODE_23484_length_172_cov_7.284553_g23068_i0 PRJNA168635 23484 172 7.284553 12.52943116 uncultured Mucorales 358438 Fungi Fungi 285 1.31e-72   NTclustered gi|299778444|gb|GQ330624.1| 358438 g23068 i0 96.532 88.5697674418605 173 4 99 2 1 171 30 202 Uncultured Mucorales clone PR3_4E_28 18S ribosomal RNA gene, partial sequence blastn 15234 285 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales     uncultured Mucorales
4882297 4882297 PRJNA168635_P_NODE_34204_length_155_cov_4.179245_g33788_i0 PRJNA168635 34204 155 4.179245 6.47782975 Fungi 4751 Fungi Fungi 278 1.93e-70   NTclustered gi|350284204|gb|JF723554.1| 4841 g33788 i0 99.346 98.7096774193548 153 1 99 0 1 153 364 212 Mucor racemosus strain LMSA 1.09.174 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 15300 278 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
8706946 8706946 PRJNA168635_P_NODE_16087_length_199_cov_26.580000_g15671_i0 PRJNA168635 16087 199 26.58 52.8942 Opisthokonta 33154 Fungi Fungi 316 5.55e-82   NTclustered gi|219813568|gb|FJ553782.1| 450315 g15671 i0 95.522 102.618090452261 201 4 98 2 2 197 361 161 Uncultured Mortierella clone LTSP_EUKA_P4H14 18S ribosomal RNA, 18S-25/28S ribosomal RNA intergenic spacer, partial sequence blastn 20421 318 0.993710691823899 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae   uncultured Mortierella
9292715 9292715 PRJNA168635_P_NODE_33648_length_157_cov_3.018519_g33232_i0 PRJNA168635 33648 157 3.018519 4.73907483 Diversispora clara 1048767 Fungi Fungi 141 2.69e-29   NTclustered gi|399497802|emb|FR873633.1| 1048767 g33232 i0 92.857 62.4076433121019 98 5 62 2 61 157 1122 1026 Diversispora sp. JP-2011 genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, clone 1.12 blastn 9798 141 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Diversisporaceae Diversispora Diversispora clara
10568644 10568644 PRJNA168635_P_NODE_29549_length_164_cov_1.826087_g29133_i0 PRJNA168635 29549 164 1.826087 2.99478268 Diversispora versiformis 1963269 Fungi Fungi 97.1 6.24e-16   NTclustered gi|56791308|gb|AY842573.1| 1963269 g29133 i0 86.517 9.94512195121951 89 10 54 2 73 160 368 281 Glomus versiforme clone LSU1 large subunit ribosomal RNA gene, partial sequence blastn 1631 97.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Diversisporaceae Diversispora Diversispora versiformis
13118448 13118448 PRJNA168635_P_NODE_34431_length_154_cov_11.514286_g34015_i0 PRJNA168635 34431 154 11.514286 17.73200044 uncultured Pilobolus 1537592 Fungi Fungi 73.1 9.7e-9   NTclustered gi|2111365341|emb|OU501388.1| 1537592 g34015 i0 87.302 0.409090909090909 63 8 41 0 40 102 64 2 uncultured Pilobolus genomic DNA sequence contains ITS1 blastn 63 73.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Pilobolaceae   uncultured Pilobolus
13807619 13807619 PRJNA168635_P_NODE_20831_length_179_cov_9.184615_g20415_i0 PRJNA168635 20831 179 9.184615 16.44046085 Eukaryota 2759 Fungi Fungi 121 4.0999999999999997e-23   NTclustered gi|699209620|gb|KM208472.1| 241622 g20415 i0 89.474 53.9106145251397 95 10 53 0 21 115 719 813 Uncultured Glomeromycota clone SHN3_35 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 9650 122 0.991803278688525 Eukaryota Opisthokonta Fungi Mucoromycota         uncultured Glomeromycotina
14393592 14393592 PRJNA168635_P_NODE_22112_length_176_cov_1.629921_g21696_i0 PRJNA168635 22112 176 1.629921 2.86866096 Rhizopus microsporus 58291 Fungi Fungi 165 1.83e-36   NTclustered gi|1331199541|ref|XM_023606717.1| 1340429 g21696 i0 86.184 108.238636363636 152 21 86 0 1 152 7 158 Rhizopus microsporus ATCC 52813 polyubiquitin 5 (RHIMIDRAFT_203854), partial mRNA blastn 19050 165 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
14393728 14393728 PRJNA168635_P_NODE_32412_length_162_cov_0.858407_g31996_i0 PRJNA168635 32412 162 0.858407 1.39061934 Lichtheimia ornata 688661 Fungi Fungi 159 7.72e-35   NTclustered gi|2553584525|ref|XM_058487388.1| 688661 g31996 i0 85.161 10.537037037037 155 23 96 0 3 157 383 229 Lichtheimia ornata 40S ribosomal protein S23 (O0I10_007370), partial mRNA blastn 1707 159 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
15667095 15667095 PRJNA168635_P_NODE_11353_length_243_cov_3.510309_g10937_i0 PRJNA168635 11353 243 3.510309 8.53005087 Lichtheimia corymbifera 42458 Fungi Fungi 58.4 4.71e-4   NTclustered gi|225131089|gb|FJ345350.1| 42458 g10937 i0 100 3.35802469135802 31 0 13 0 57 87 2226 2256 Mycocladus corymbiferus strain ATCC 14058 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 816 58.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia corymbifera
16941994 16941994 PRJNA168635_P_NODE_6894_length_322_cov_6.945055_g6482_i0 PRJNA168635 6894 322 6.945055 22.3630771 Lichtheimia corymbifera 42458 Fungi Fungi 185 2.86e-42   NTclustered gi|225131089|gb|FJ345350.1| 42458 g6482 i0 84.783 41.5310559006211 184 28 57 0 80 263 3204 3387 Mycocladus corymbiferus strain ATCC 14058 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 13373 185 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia corymbifera
19490698 19490698 PRJNA168635_P_NODE_6896_length_322_cov_6.336996_g6484_i0 PRJNA168635 6896 322 6.336996 20.40512712 Ambispora sp.1 SL-2017 1945663 Fungi Fungi 71.3 8.34e-8   NTclustered gi|973529614|gb|KP756590.1| 1945663 g6484 i0 92.157 14.4347826086957 51 2 16 2 1 51 1463 1415 Ambispora sp.1 SL-2017 isolate ST7 clone 1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4648 71.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Archaeosporales Ambisporaceae Ambispora Ambispora sp.1 SL-2017
21455993 21455993 PRJNA168635_P_NODE_17057_length_193_cov_7.291667_g16641_i0 PRJNA168635 17057 193 7.291667 14.07291731 Mortierella 4855 Fungi Fungi 147 7.419999999999999e-31   NTclustered gi|411030762|gb|JX270228.1| 1253901 g16641 i0 90.265 54.4974093264249 113 9 58 2 65 176 104 215 Mortierella sp. 08CT03 28S-18S ribosomal RNA intergenic spacer, partial sequence blastn 10518 147 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella sp. 08CT03
21455998 21455998 PRJNA168635_P_NODE_17497_length_191_cov_4.140845_g17081_i0 PRJNA168635 17497 191 4.140845 7.90901395 Fungi 4751 Fungi Fungi 93.5 9.68e-15   NTclustered gi|658131632|emb|HF968958.1| 4874 g17081 i0 94.915 27.4659685863874 59 3 31 0 133 191 2135 2193 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 5246 93.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
21456096 21456096 PRJNA168635_P_NODE_29357_length_164_cov_15.713043_g28941_i0 PRJNA168635 29357 164 15.713043 25.76939052 Glomeraceae 36751 Fungi Fungi 130 6.15e-26   NTclustered gi|253683066|emb|FM865574.1| 4876 g28941 i0 86.777 72.2256097560976 121 11 72 4 4 121 352 470 Glomus intraradices 18S rRNA gene (partial), ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene (partial), isolate Att4-41, clone pHS096-12 blastn 11845 130 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus intraradices
22041196 22041196 PRJNA168635_P_NODE_29538_length_164_cov_2.130435_g29122_i0 PRJNA168635 29538 164 2.130435 3.4939134 Rhizopus arrhizus 64495 Fungi Fungi 102 1.34e-17   NTclustered gi|612507369|gb|KJ417532.1| 64495 g29122 i0 89.024 32.7012195121951 82 9 50 0 81 162 659 578 Rhizopus oryzae isolate VPCI 1007/10 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 5363 102 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
23316874 23316874 PRJNA168635_P_NODE_8499_length_289_cov_4.145833_g8084_i0 PRJNA168635 8499 289 4.145833 11.98145737 uncultured Glomeromycotina 241622 Fungi Fungi 60.2 1.6e-4   NTclustered gi|426204763|gb|JX848843.1| 241622 g8084 i0 100 0.110726643598616 32 0 11 0 8 39 647 616 Uncultured Glomeromycota clone 06B_Plate1 28S large subunit ribosomal gene, partial sequence blastn 32 60.2 1 Eukaryota Opisthokonta Fungi Mucoromycota         uncultured Glomeromycotina
24590791 24590791 PRJNA168635_P_NODE_26120_length_168_cov_0.983193_g25704_i0 PRJNA168635 26120 168 0.983193 1.65176424 Rhizopus microsporus 58291 Fungi Fungi 102 1.38e-17   NTclustered gi|1331192233|ref|XM_023608248.1| 1340429 g25704 i0 82.5 5.30357142857143 120 17 70 4 1 118 363 246 Rhizopus microsporus ATCC 52813 L30e-like protein (RHIMIDRAFT_234884), partial mRNA blastn 891 102 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;