RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA168635" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA168635 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4191729 4191729 PRJNA168635_P_NODE_32504_length_161_cov_4.410714_g32088_i0 PRJNA168635 32504 161 4.410714 7.10124954 Tichowtungia aerotolerans 2697043 Bacteria Bacteria 178 2.12e-40   NTclustered gi|1798450978|gb|CP047593.1| 2697043 g32088 i0 86.875 698.062111801242 160 19 98 1 1 158 320571 320412 Tichowtungia aerotolerans strain S-5007 chromosome, complete genome blastn 112388 178 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Tichowtungiia Tichowtungiales Tichowtungiaceae Tichowtungia Tichowtungia aerotolerans
8018124 8018124 PRJNA168635_P_NODE_9347_length_273_cov_3.379464_g8932_i0 PRJNA168635 9347 273 3.379464 9.22593672 Kiritimatiella glycovorans 1307763 Bacteria Bacteria 204 6.539999999999999e-48   NTclustered gi|827038732|gb|CP010904.1| 1307763 g8932 i0 86.316 30.2490842490842 190 23 69 3 12 199 588722 588534 Kiritimatiella glycovorans strain L21-Fru-AB chromosome, complete genome blastn 8258 204 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Kiritimatiellaceae Kiritimatiella Kiritimatiella glycovorans
10568489 10568489 PRJNA168635_P_NODE_19489_length_184_cov_1.511111_g19073_i0 PRJNA168635 19489 184 1.511111 2.78044424 Kiritimatiellota bacterium B12222 3040511 Bacteria Bacteria 147 7.0000000000000015e-31   NTclustered gi|2485208337|gb|CP120722.1| 3040511 g19073 i0 84.416 7.6195652173913 154 18 81 6 35 183 417820 417972 Kiritimatiellota bacterium B12222 chromosome, complete genome blastn 1402 147 1 Bacteria PVC group Pseudomonadati Kiritimatiellota         Kiritimatiellota bacterium B12222
16356553 16356553 PRJNA168635_P_NODE_13213_length_223_cov_3.264368_g12797_i0 PRJNA168635 13213 223 3.264368 7.27954064 Kiritimatiellota 134625 Bacteria Bacteria 196 8.64e-46   NTclustered gi|827038732|gb|CP010904.1| 1307763 g12797 i0 82.667 287.112107623318 225 35 100 4 1 223 588357 588135 Kiritimatiella glycovorans strain L21-Fru-AB chromosome, complete genome blastn 64026 196 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Kiritimatiellaceae Kiritimatiella Kiritimatiella glycovorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;