RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA168635" and tax_phylum = "Haptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Haptophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA168635 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9292554 9292554 PRJNA168635_P_NODE_21688_length_177_cov_1.796875_g21272_i0 PRJNA168635 21688 177 1.796875 3.18046875 Chrysochromulina sp. 2200936 Haptophyta other_Eukaryota 222 1.08e-53   NTclustered gi|2059554223|gb|MZ469764.1| 2200936 g21272 i0 91.975 111.158192090395 162 8 90 5 19 177 167 326 Chrysochromulina sp. strain DAD-ALGEUK-36 large subunit ribosomal RNA gene, partial sequence; chloroplast blastn 19675 222 1 Eukaryota Haptista   Haptophyta   Prymnesiales Chrysochromulinaceae Chrysochromulina Chrysochromulina sp.
11257420 11257420 PRJNA168635_P_NODE_12689_length_228_cov_3.458101_g12273_i0 PRJNA168635 12689 228 3.458101 7.88447028 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 411 2.909999999999999e-110   NTclustered gi|408717423|gb|JX453462.1| 171259 g12273 i0 99.123 86.9298245614035 228 2 100 0 1 228 337 110 Uncultured haptophyte clone Finsevatn_8912 18S ribosomal RNA gene, partial sequence blastn 19820 411 1 Eukaryota Haptista   Haptophyta         Haptophyta environmental samples

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;