RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA168635" and tax_phylum = "Gastrotricha"

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tax_superkingdom 1

tax_phylum 1

  • Gastrotricha · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA168635 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7432220 7432220 PRJNA168635_P_NODE_29706_length_164_cov_1.365217_g29290_i0 PRJNA168635 29706 164 1.365217 2.23895588 Chaetonotida 41320 Gastrotricha other_Eukaryota 78.7 2.26e-10   NTclustered gi|389075653|gb|JN185535.1| 1194612 g29290 i0 82.418 52.8841463414634 91 14 55 2 3 93 2670 2758 Heterolepidoderma acidophilum voucher TK53 28S ribosomal RNA gene, partial sequence blastn 8673 78.7 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Heterolepidoderma Heterolepidoderma acidophilum
13118501 13118501 PRJNA168635_P_NODE_511_length_987_cov_11.795309_g363_i0 PRJNA168635 511 987 11.795309 116.41969983 Lepidodasys sp. NBP-2014 1562992 Gastrotricha other_Eukaryota 204 2.6099999999999997e-47   NTclustered gi|700212512|gb|KF921015.1| 1562992 g363 i0 88 18.5288753799392 175 18 18 3 1 173 2167 1994 Lepidodasys sp. NBP-2014 isolate OM10-2003 28S ribosomal RNA gene, partial sequence blastn 18288 204 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Macrodasyida Lepidodasyidae Lepidodasys Lepidodasys sp. NBP-2014
16941711 16941711 PRJNA168635_P_NODE_22234_length_176_cov_1.188976_g21818_i0 PRJNA168635 22234 176 1.188976 2.09259776 Chaetonotus aff. euhystrix MK-2019 2614562 Gastrotricha other_Eukaryota 298 1.73e-76   NTclustered gi|1748013824|gb|MN496241.1| 2614562 g21818 i0 97.159 101.505681818182 176 5 100 0 1 176 1466 1641 Chaetonotus aff. euhystrix MK-2019 voucher TR_3.1 large subunit ribosomal RNA gene, partial sequence blastn 17865 298 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Chaetonotus Chaetonotus aff. euhystrix MK-2019
20766093 20766093 PRJNA168635_P_NODE_26837_length_167_cov_1.940678_g26421_i0 PRJNA168635 26837 167 1.940678 3.24093226 Chaetonotus aff. maximus MK-2019 2614550 Gastrotricha other_Eukaryota 303 3.5e-78   NTclustered gi|1748013872|gb|MN496206.1| 2614550 g26421 i0 99.401 100.101796407186 167 1 100 0 1 167 185 19 Chaetonotus aff. maximus MK-2019 voucher HA_28.5 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 16717 303 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Chaetonotus Chaetonotus aff. maximus MK-2019

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;