RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA168635" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA168635 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1639537 1639537 PRJNA168635_P_NODE_6782_length_325_cov_5.782609_g6371_i0 PRJNA168635 6782 325 5.782609 18.79347925 Hexamita inflata 28002 Fornicata other_Eukaryota 381 3.429999999999999e-101   NTclustered gi|459348792|gb|KC249997.1| 28002 g6371 i0 87.879 25.7015384615385 330 32 100 6 1 325 1096 1422 Hexamita inflata 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 8353 381 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
6742462 6742462 PRJNA168635_P_NODE_8546_length_288_cov_4.054393_g8131_i0 PRJNA168635 8546 288 4.054393 11.67665184 Hexamita inflata 28002 Fornicata other_Eukaryota 350 8.44e-92   NTclustered gi|459348792|gb|KC249997.1| 28002 g8131 i0 88.699 55.9409722222222 292 25 100 8 1 288 2963 2676 Hexamita inflata 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 16111 350 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
12532784 12532784 PRJNA168635_P_NODE_14270_length_213_cov_6.902439_g13854_i0 PRJNA168635 14270 213 6.902439 14.70219507 Trepomonas 44997 Fornicata other_Eukaryota 394 2.7e-105   NTclustered gi|2592099176|gb|OR670372.1| 460177 g13854 i0 100 60.2723004694836 213 0 100 0 1 213 651 439 Trepomonas sp. PPS6 isolate Bot small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 12838 394 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Trepomonas Trepomonas sp. PPS6
13118512 13118512 PRJNA168635_P_NODE_5691_length_354_cov_6.888525_g5286_i0 PRJNA168635 5691 354 6.888525 24.3853785 Hexamita inflata 28002 Fornicata other_Eukaryota 375 1.7499999999999995e-99   NTclustered gi|459348792|gb|KC249997.1| 28002 g5286 i0 85.876 6.75706214689266 354 48 99 2 2 354 281 633 Hexamita inflata 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 2392 375 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
15081735 15081735 PRJNA168635_P_NODE_13432_length_221_cov_2.889535_g13016_i0 PRJNA168635 13432 221 2.889535 6.38587235 Trepomonas 44997 Fornicata other_Eukaryota 272 1.38e-68   NTclustered gi|2592099176|gb|OR670372.1| 460177 g13016 i0 89.14 91.5203619909502 221 21 100 2 1 221 823 606 Trepomonas sp. PPS6 isolate Bot small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 20226 272 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Trepomonas Trepomonas sp. PPS6
15081913 15081913 PRJNA168635_P_NODE_5592_length_357_cov_5.298701_g5187_i0 PRJNA168635 5592 357 5.298701 18.91636257 Trepomonas 44997 Fornicata other_Eukaryota 636 7.339999999999998e-178   NTclustered gi|2592099177|gb|OR670373.1| 460177 g5187 i0 100 86.1708683473389 344 0 96 0 9 352 398 55 Trepomonas sp. PPS6 isolate MACHUPICCHU small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 30763 636 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Trepomonas Trepomonas sp. PPS6
20766257 20766257 PRJNA168635_P_NODE_5137_length_373_cov_4.756173_g4733_i0 PRJNA168635 5137 373 4.756173 17.74052529 Hexamita inflata 28002 Fornicata other_Eukaryota 407 6.57e-109   NTclustered gi|459348792|gb|KC249997.1| 28002 g4733 i0 89.297 2.77479892761394 327 32 87 3 1 326 698 1022 Hexamita inflata 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 1035 407 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
21455950 21455950 PRJNA168635_P_NODE_13717_length_218_cov_6.544379_g13301_i0 PRJNA168635 13717 218 6.544379 14.26674622 Trepomonas 44997 Fornicata other_Eukaryota 403 4.62e-108   NTclustered gi|2592099221|gb|OR670404.1| 460177 g13301 i0 100 98.2844036697248 218 0 100 0 1 218 1025 1242 Trepomonas sp. PPS6 isolate 77MVwsc small subunit ribosomal RNA gene, partial sequence blastn 21426 403 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Trepomonas Trepomonas sp. PPS6

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;