RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA168635" and tax_phylum = "Candidatus Magasanikiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Magasanikiibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA168635 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16941686 16941686 PRJNA168635_P_NODE_20894_length_179_cov_3.169231_g20478_i0 PRJNA168635 20894 179 3.169231 5.67292349 Candidatus Magasanikbacteria bacterium GW2011_GWA2_37_8 1619036 Bacteria Bacteria 296 6.34e-76   NTclustered gi|1118703600|gb|KX123513.1| 1619036 g20478 i0 96.629 98.9106145251397 178 6 99 0 2 179 340 517 Candidatus Magasanikbacteria bacterium GW2011_GWA2_37_8 16S ribosomal RNA gene, partial sequence blastn 17705 296 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikbacteria bacterium GW2011_GWA2_37_8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;