RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA168635" and tax_phylum = "Candidatus Levyibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Levyibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA168635 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4191764 4191764 PRJNA168635_P_NODE_35444_length_151_cov_6.607843_g35028_i0 PRJNA168635 35444 151 6.607843 9.97784293 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 195 1.93e-45   NTclustered gi|2874253967|emb|OY970292.1| 2052151 g35028 i0 90.066 2.85430463576159 151 14 99 1 2 151 718585 718435 MAG: Candidatus Levybacteria bacterium isolate MFD01916.bin.c.8 genome assembly, chromosome: 1 blastn 431 195 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium
15667107 15667107 PRJNA168635_P_NODE_11893_length_237_cov_4.047872_g11477_i0 PRJNA168635 11893 237 4.047872 9.59345664 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 239 1.52e-58   NTclustered gi|2874253967|emb|OY970292.1| 2052151 g11477 i0 87.383 2.78902953586498 214 20 89 5 6 216 718654 718445 MAG: Candidatus Levybacteria bacterium isolate MFD01916.bin.c.8 genome assembly, chromosome: 1 blastn 661 239 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;