RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA168635" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA168635 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
364231 364231 PRJNA168635_P_NODE_12201_length_233_cov_7.451087_g11785_i0 PRJNA168635 12201 233 7.451087 17.36103271 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 204 5.439999999999999e-48   NTclustered gi|2575803556|emb|OY729432.1| 2838779 g11785 i0 86.631 219.845493562232 187 22 79 3 49 233 2239334 2239149 MAG: Candidatus Binatia bacterium isolate b65fbbe8-1638-4b94-9072-1473f084fbf4 genome assembly, chromosome: 1 blastn 51224 204 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
14393575 14393575 PRJNA168635_P_NODE_2132_length_554_cov_12.089109_g1760_i0 PRJNA168635 2132 554 12.089109 66.97366386 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 250 1.8e-61   NTclustered gi|2891481979|emb|OZ219754.1| 3036252 g1760 i0 76.939 63.1498194945848 477 87 84 18 91 553 2070099 2070566 MAG: uncultured Candidatus Binatia bacterium isolate 58a26a4a-5c73-4e1d-804e-87f8126ae6b7 genome assembly, chromosome: 1 blastn 34985 250 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium
16941905 16941905 PRJNA168635_P_NODE_3474_length_447_cov_11.489950_g3074_i0 PRJNA168635 3474 447 11.48995 51.3600765 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 119 4.21e-22   NTclustered gi|2891481979|emb|OZ219754.1| 3036252 g3074 i0 89.474 2.11633109619687 95 8 21 2 185 279 2068844 2068936 MAG: uncultured Candidatus Binatia bacterium isolate 58a26a4a-5c73-4e1d-804e-87f8126ae6b7 genome assembly, chromosome: 1 blastn 946 119 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium
22731079 22731079 PRJNA168635_P_NODE_30458_length_163_cov_2.701754_g30042_i0 PRJNA168635 30458 163 2.701754 4.40385902 Bacteria 2 Bacteria Bacteria 145 2.18e-30   NTclustered gi|2814788387|emb|OY762897.2| 2838779 g30042 i0 86.822 6.61963190184049 129 17 79 0 25 153 595733 595605 MAG: Candidatus Binatia bacterium isolate 08c4157d-86a7-49cc-8b26-f3076a3ae996 genome assembly, chromosome: 1 blastn 1079 145 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;