RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA168635" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA168635 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11843394 11843394 PRJNA168635_P_NODE_9510_length_270_cov_5.407240_g9095_i0 PRJNA168635 9510 270 5.40724 14.599548 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 158 5.1e-34   NTclustered gi|2874253743|emb|OY969586.1| 2052149 g9095 i0 77.617 62.9111111111111 277 50 99 10 1 269 2018820 2019092 MAG: Candidatus Aminicenantes bacterium isolate MFD10007.bin.c.2 genome assembly, chromosome: 1 blastn 16986 158 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
24590565 24590565 PRJNA168635_P_NODE_13980_length_216_cov_1.658683_g13564_i0 PRJNA168635 13980 216 1.658683 3.58275528 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 141 3.95e-29   NTclustered gi|2874253743|emb|OY969586.1| 2052149 g13564 i0 82.424 91.337962962963 165 25 75 3 1 162 2019088 2018925 MAG: Candidatus Aminicenantes bacterium isolate MFD10007.bin.c.2 genome assembly, chromosome: 1 blastn 19729 141 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;